RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 RUVBL2Q9Y230 463 aaKnown RBP4.25□□□□□ -1.73
COPS3-204ENST00000462236 B3GALT5Q9Y2C3 310 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 YARS2Q9Y2Z4 477 aaKnown RBP4.25□□□□□ -1.73
COPS3-204ENST00000462236 ATG4BQ9Y4P1 393 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 MAGED1Q9Y5V3 778 aaPredicted RBP4.25□□□□□ -1.73
COPS3-204ENST00000462236 A0A096LNT2 108 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 TRGV5A0A0B4J1U4 118 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 PRMT5O14744 637 aaPredicted RBP4.24□□□□□ -1.73
COPS3-204ENST00000462236 CHST10O43529 356 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 SYNGR3O43761 229 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 LCMT2O60294 686 aaKnown RBP4.24□□□□□ -1.73
COPS3-204ENST00000462236 GALR3O60755 368 aaPredicted RBP4.24□□□□□ -1.73
COPS3-204ENST00000462236 CDC123O75794 336 aaPredicted RBP4.24□□□□□ -1.73
COPS3-204ENST00000462236 OR6B1O95007 311 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 SERPING1P05155 500 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 FAM157CP0CG43 387 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 SMIM10L1P0DMW3 83 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 SOX3P41225 446 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 SSR4P51571 173 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 ISL1P61371 349 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 RPS15AP62244 130 aaKnown RBP4.24□□□□□ -1.73
COPS3-204ENST00000462236 DMTNQ08495 405 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 TNK1Q13470 666 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 POU6F1Q14863 301 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 SLC10A1Q14973 349 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 RPS6KA1Q15418 735 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 ANKRD20A4Q4UJ75 823 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 CTSL3PQ5NE16 218 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 GCNT6Q5T4J0 391 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 OR7E24Q6IFN5 339 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 TTC23LQ6PF05 361 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 AFTPHQ6ULP2 937 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 SLC26A11Q86WA9 606 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 LACC1Q8IV20 430 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 LRRC25Q8N386 305 aaPredicted RBP4.24□□□□□ -1.73
COPS3-204ENST00000462236 TMEM156Q8N614 296 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 PPFIBP2Q8ND30 876 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 B3GNT7Q8NFL0 401 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 OR5T3Q8NGG3 340 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 OR52I2Q8NH67 350 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 MOSPD2Q8NHP6 518 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 NEIL3Q8TAT5 605 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 MCOLN3Q8TDD5 553 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 ROBO4Q8WZ75 1007 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 P3H4Q92791 437 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 PEX13Q92968 403 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 SMIM10Q96HG1 83 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 NAP1L5Q96NT1 182 aaPredicted RBP4.24□□□□□ -1.73
COPS3-204ENST00000462236 BIRC8Q96P09 236 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 RASL10BQ96S79 203 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 PKP4Q99569 1192 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 CCL19Q99731 98 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 FAM129AQ9BZQ8 928 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 ANKHQ9HCJ1 492 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 ZNHIT6Q9NWK9 470 aaKnown RBP4.24□□□□□ -1.73
COPS3-204ENST00000462236 HPF1Q9NWY4 346 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 UTP6Q9NYH9 597 aaKnown RBP4.24□□□□□ -1.73
COPS3-204ENST00000462236 KLHL9Q9P2J3 617 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 SLC2A6Q9UGQ3 507 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 ACAD8Q9UKU7 415 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 NAALAD2Q9Y3Q0 740 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 IKBKGQ9Y6K9 419 aa4.24□□□□□ -1.73
COPS3-204ENST00000462236 NUP214P35658 2090 aaPredicted RBP4.24□□□□□ -1.73
COPS3-204ENST00000462236 TRBV11-1A0A0K0K1C0 115 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 PRAC2D3DTV9 90 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 GFYI3L273 518 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 PSTPIP1O43586 416 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 GPR137BO60478 399 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 OR2J2O76002 312 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 SLC16A8O95907 504 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 CCL3P10147 92 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 CRYGSP22914 178 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 JAK1P23458 1154 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 IMPA1P29218 277 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 RPA3P35244 121 aaPredicted RBP4.23□□□□□ -1.73
COPS3-204ENST00000462236 KRT20P35900 424 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 HSD17B2P37059 387 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 COILP38432 576 aaPredicted RBP4.23□□□□□ -1.73
COPS3-204ENST00000462236 SLC1A1P43005 524 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 DNASE1L1P49184 302 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 FUT6P51993 359 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 ADARP55265 1226 aaKnown RBP4.23□□□□□ -1.73
COPS3-204ENST00000462236 RPL24P83731 157 aaKnown RBP4.23□□□□□ -1.73
COPS3-204ENST00000462236 PLGLB1Q02325 96 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 HERC3Q15034 1050 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 TMED2Q15363 201 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 NHSL2Q5HYW2 709 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 CCNYL2Q5T2Q4 361 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 RTL4Q6ZR62 310 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 FOXL2NBQ6ZUU3 175 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 ABHD13Q7L211 337 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 KATNAL2Q8IYT4 538 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 RAB42Q8N4Z0 105 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 CAMKVQ8NCB2 501 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 ZNF740Q8NDX6 193 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 OR4L1Q8NH43 312 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 BBS10Q8TAM1 723 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 ACTL9Q8TC94 416 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 ATL1Q8WXF7 558 aa4.23□□□□□ -1.73
COPS3-204ENST00000462236 NCLNQ969V3 563 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms