RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 LIPNQ5VXI9 398 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 TTC23Q5W5X9 447 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 BLOC1S2Q6QNY1 142 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 TFAP2EQ6VUC0 442 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 VASH2Q86V25 355 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 ANKFN1Q8N957 763 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 OR10A7Q8NGE5 316 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 OR51G2Q8NGK0 314 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 FGGYQ96C11 551 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 TRIM44Q96DX7 344 aaPredicted RBP2.4□□□□□ -2.03
RFC4-211ENST00000460408 PELI1Q96FA3 418 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 SENP8Q96LD8 212 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 SRXN1Q9BYN0 137 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 CRNKL1Q9BZJ0 848 aaKnown RBP2.4□□□□□ -2.03
RFC4-211ENST00000460408 POLR1EQ9GZS1 481 aaKnown RBP2.4□□□□□ -2.03
RFC4-211ENST00000460408 EHD1Q9H4M9 534 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 AIPL1Q9NZN9 384 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 NPIPA1Q9UND3 350 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 MRPS33Q9Y291 106 aaKnown RBP2.4□□□□□ -2.03
RFC4-211ENST00000460408 MAB21L2Q9Y586 359 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 ALG6Q9Y672 507 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 KIF1AQ12756 1690 aa2.4□□□□□ -2.03
RFC4-211ENST00000460408 SBNO1A3KN83 1393 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 MEGF6O75095 1541 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 IGHV7-81A0A0B4J1V7 117 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 SMIM28A0A1B0GU29 152 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 KLLNB2CW77 178 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 K7EQM0 130 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 SULT2B1O00204 365 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 SPAG6O75602 509 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 LYPD3O95274 346 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 IGHG4P01861 327 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 HNF1AP20823 631 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 CHI3L1P36222 383 aaPredicted RBP2.39□□□□□ -2.03
RFC4-211ENST00000460408 RGRP47804 291 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 DIO3P55073 304 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 CBX1P83916 185 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 BCL2L1Q07817 233 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 CUL1Q13616 776 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 MOB3BQ86TA1 216 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 ACOT1Q86TX2 421 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 PPP1R27Q86WC6 154 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 C11orf53Q8IXP5 236 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 ZNF683Q8IZ20 524 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 KIR3DL3Q8N743 410 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 FAM133AQ8N9E0 248 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 SYT14Q8NB59 555 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 CATSPER1Q8NEC5 780 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 STEAP2Q8NFT2 490 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 PAQR8Q8TEZ7 354 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 SLC5A11Q8WWX8 675 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 SH3YL1Q96HL8 342 aaPredicted RBP2.39□□□□□ -2.03
RFC4-211ENST00000460408 C7orf34Q96L11 122 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 IL4I1Q96RQ9 567 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 ZNF607Q96SK3 696 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 ZNF670Q9BS34 389 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 ZSCAN5AQ9BUG6 496 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 RHBGQ9H310 441 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 FANCFQ9NPI8 374 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 RNF14Q9UBS8 474 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 ERVW-1Q9UQF0 538 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 UNC79Q9P2D8 2635 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 HFM1A2PYH4 1435 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 ARHGEF5Q12774 1597 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 LRRIQ1Q96JM4 1722 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 ATP7BP35670 1465 aa2.39□□□□□ -2.03
RFC4-211ENST00000460408 DUOX2Q9NRD8 1548 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 VIRMAQ69YN4 1812 aaKnown RBP2.38□□□□□ -2.03
RFC4-211ENST00000460408 CHD8Q9HCK8 2581 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 A8MU10 97 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 K7N7A8 449 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 CEP290O15078 2479 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 HDAC3O15379 428 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 PRKYO43930 277 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 UGT2B17O75795 530 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 KIAA0754O94854 1291 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 IGHV3-48P01763 117 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 UGT2B4P06133 528 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 OR8U8P0C7N1 319 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 ZNF19P17023 458 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 PSMB1P20618 241 aaKnown RBP2.38□□□□□ -2.03
RFC4-211ENST00000460408 ZBTB25P24278 435 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 MMP11P24347 488 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 LAP3P28838 519 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 AQP1P29972 269 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 OR3A4PP47883 348 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 P2RY1P47900 373 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 PRKXP51817 358 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 ARFIP1P53367 373 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 ELAVL3Q14576 367 aaKnown RBP2.38□□□□□ -2.03
RFC4-211ENST00000460408 TPD52L1Q16890 204 aaPredicted RBP2.38□□□□□ -2.03
RFC4-211ENST00000460408 QSER1Q2KHR3 1735 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 SLC25A52Q3SY17 297 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 CDC42BPGQ6DT37 1551 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 PKD1L3Q7Z443 1732 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 SLC38A6Q8IZM9 456 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 SVOPLQ8N434 492 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 DHRSXQ8N5I4 330 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 C14orf178Q8N769 122 aaPredicted RBP2.38□□□□□ -2.03
RFC4-211ENST00000460408 STXBP6Q8NFX7 210 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms