RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ZSWIM7Q19AV6 140 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 CCDC103Q8IW40 242 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 OR10A6Q8NH74 314 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 TSPEARQ8WU66 669 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 PSD2Q9BQI7 771 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 PRR14Q9BWN1 585 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 TMEM38AQ9H6F2 299 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 FANCFQ9NPI8 374 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 RASSF1Q9NS23 344 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 C6orf203Q9P0P8 240 aaPredicted RBP16.63■□□□□ 0.25
USP39-209ENST00000458268 TMEM181Q9P2C4 612 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 HDGFL3Q9Y3E1 203 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 ANKRD17O75179 2603 aaKnown RBP16.62■□□□□ 0.25
USP39-209ENST00000458268 FAAHO00519 579 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 CYTIPO60759 359 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 PMS2P2O95744 297 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 PTNP21246 168 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 FPR1P21462 350 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 PRKAR1BP31321 381 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 IDUAP35475 653 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 GYS2P54840 703 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 OR7A5Q15622 319 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 ADRM1Q16186 407 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 RABL3Q5HYI8 236 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 BEND4Q6ZU67 534 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 MTDHQ86UE4 582 aaKnown RBP16.62■□□□□ 0.25
USP39-209ENST00000458268 COMTD1Q86VU5 262 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 PTOV1Q86YD1 416 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 ZNF100Q8IYN0 542 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 SLC26A7Q8TE54 656 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 DACH2Q96NX9 599 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 ELAC2Q9BQ52 826 aaKnown RBP16.62■□□□□ 0.25
USP39-209ENST00000458268 TAPBPLQ9BX59 468 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 ADPRHL2Q9NX46 363 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 TESMINQ9Y4I5 508 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 LRBAP50851 2863 aa16.62■□□□□ 0.25
USP39-209ENST00000458268 PRORSD1PA6NEY8 169 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 ELOA3DA6NLF2 546 aaPredicted RBP16.61■□□□□ 0.25
USP39-209ENST00000458268 RAMP1O60894 148 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 SERPINB7O75635 380 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 IGHV3-9P01782 118 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 IMPDH2P12268 514 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 SEC24CP53992 1094 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 CEACAM7Q14002 265 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 ELOA3BQ3SY89 546 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 NANOGP8Q6NSW7 305 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 TFAP2EQ6VUC0 442 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 CXorf67Q86X51 503 aaPredicted RBP16.61■□□□□ 0.25
USP39-209ENST00000458268 CDC20BQ86Y33 519 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 WFDC8Q8IUA0 241 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 UBE2J2Q8N2K1 259 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 ELOA3Q8NG57 546 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 OR52E4Q8NGH9 312 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 PIGXQ8TBF5 258 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 C3orf49Q96BT1 292 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 PIK3IP1Q96FE7 263 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 ZNF317Q96PQ6 595 aaPredicted RBP16.61■□□□□ 0.25
USP39-209ENST00000458268 ECSITQ9BQ95 431 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 NAA11Q9BSU3 229 aaPredicted RBP16.61■□□□□ 0.25
USP39-209ENST00000458268 ADAM19Q9H013 955 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 LIME1Q9H400 295 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 NANOGQ9H9S0 305 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 MRGBPQ9NV56 204 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 ZNF226Q9NYT6 803 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 EMC3Q9P0I2 261 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 PRSS50Q9UI38 385 aa16.61■□□□□ 0.25
USP39-209ENST00000458268 ZNF814B7Z6K7 855 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 ZNF208O43345 1280 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 IL32P24001 234 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 FKBP2P26885 142 aaKnown RBP16.6■□□□□ 0.25
USP39-209ENST00000458268 CLK1P49759 484 aaKnown RBP16.6■□□□□ 0.25
USP39-209ENST00000458268 SLC35A1P78382 337 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 DMTNQ08495 405 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 ABLIM2Q6H8Q1 611 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 DHRS4L2Q6PKH6 230 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 STAC2Q6ZMT1 411 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 GALNT5Q7Z7M9 940 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 PCYOX1LQ8NBM8 494 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 VANGL1Q8TAA9 524 aaPredicted RBP16.6■□□□□ 0.25
USP39-209ENST00000458268 SLC25A36Q96CQ1 311 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 LRRC58Q96CX6 371 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 RCN3Q96D15 328 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 TACO1Q9BSH4 297 aaKnown RBP16.6■□□□□ 0.25
USP39-209ENST00000458268 ACTR6Q9GZN1 396 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 KAT8Q9H7Z6 458 aaKnown RBP16.6■□□□□ 0.25
USP39-209ENST00000458268 SELENONQ9NZV5 590 aa16.6■□□□□ 0.25
USP39-209ENST00000458268 NOSIPQ9Y314 301 aaKnown RBP16.6■□□□□ 0.25
USP39-209ENST00000458268 AKAP6Q13023 2319 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 BBIP1A8MTZ0 92 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 M0QX08 132 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 M0R3H8 397 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 AKR7A3O95154 331 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 ADAP00813 363 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 GPIP06744 558 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 EDNRAP25101 427 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 GTF2E2P29084 291 aaKnown RBP16.59■□□□□ 0.25
USP39-209ENST00000458268 RBBP4Q09028 425 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 DAZAP2Q15038 168 aaPredicted RBP16.59■□□□□ 0.25
USP39-209ENST00000458268 OTUD3Q5T2D3 398 aaPredicted RBP16.59■□□□□ 0.25
USP39-209ENST00000458268 C1orf140Q5VVS0 124 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms