RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 UBTFL6P0CB48 400 aaPredicted RBP12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 CPA3P15088 417 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 ZNF23P17027 643 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 FKBP2P26885 142 aaKnown RBP12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 MAPK1P28482 360 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 NTF4P34130 210 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 CCT5P48643 541 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 SLC16A1P53985 500 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 TGFBR3Q03167 851 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 ZNF141Q15928 474 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 MST1LQ2TV78 715 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 CR1LQ2VPA4 569 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 BHLHB9Q6PI77 547 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 CASP12Q6UXS9 341 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 TRMT10CQ7L0Y3 403 aaKnown RBP12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 HOMEZQ8IX15 550 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 DDIASQ8IXT1 998 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 OR5D16Q8NGK9 328 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 ZNF563Q8TA94 476 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 SFXN5Q8TD22 340 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 MZB1Q8WU39 189 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 C12orf65Q9H3J6 166 aaKnown RBP12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 PARPBPQ9NWS1 579 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 CHRNA9Q9UGM1 479 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 DCTN4Q9UJW0 460 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 MOKQ9UQ07 419 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 HDGFL3Q9Y3E1 203 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 DNAJC15Q9Y5T4 150 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 A0A1W2PPM1 405 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 DUXAA6NLW8 204 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 PDLIM1O00151 329 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 CFLARO15519 480 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 RIPK2O43353 540 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 PLIN3O60664 434 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 STX11O75558 287 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 C6orf47O95873 294 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 WNT11O96014 354 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 AK1P00568 194 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 PRPS1P60891 318 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 WHAMMP3Q1A5X7 153 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 KANK2Q63ZY3 851 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 KLHL24Q6TFL4 600 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 C12orf54Q6X4T0 127 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 EIF3MQ7L2H7 374 aaKnown RBP12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 SLC46A3Q7Z3Q1 461 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 CCDC103Q8IW40 242 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 C17orf53Q8N3J3 647 aaPredicted RBP12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 NOA1Q8NC60 698 aaKnown RBP12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 OR5AK3PQ8NH89 298 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 DNAJA3Q96EY1 480 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 ARL5BQ96KC2 179 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 PRPF18Q99633 342 aaKnown RBP12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 VRK1Q99986 396 aaPredicted RBP12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 CCDC106Q9BWC9 280 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 CTPS2Q9NRF8 586 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 SLC9A8Q9Y2E8 581 aa12.53□□□□□ -0.4
UPF3AP2-201ENST00000457924 FCMRO60667 390 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 UGT2B17O75795 530 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 URI1O94763 535 aaPredicted RBP12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 MATN1P21941 496 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 SOAT1P35610 550 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 SERPINF1P36955 418 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 SRP14P37108 136 aaKnown RBP12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 CLK1P49759 484 aaKnown RBP12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 OR2B6P58173 313 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 SLC25A3Q00325 362 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 GRINAQ7Z429 371 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 SYT9Q86SS6 491 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 MEX3DQ86XN8 651 aaKnown RBP12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 ANKS4BQ8N8V4 417 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 PPP3R2Q96LZ3 170 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 KCNS3Q9BQ31 491 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 BPESC1Q9GZL8 116 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 KCNE5Q9UJ90 142 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 MKLN1Q9UL63 735 aa12.52□□□□□ -0.41
UPF3AP2-201ENST00000457924 CENPVL1A0A0U1RR11 272 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 LYPLA1O75608 230 aaPredicted RBP12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 ITGA2P17301 1181 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 CRHR1P34998 444 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 PGM1P36871 562 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 RPS26P62854 115 aaKnown RBP12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 PTGR1Q14914 329 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 ARHGAP11BQ3KRB8 267 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 C16orf62Q7Z3J2 963 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 SPATA19Q7Z5L4 167 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 TWIST2Q8WVJ9 160 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 COQ8BQ96D53 544 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 C1orf159Q96HA4 380 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 NAA11Q9BSU3 229 aaPredicted RBP12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 SOX7Q9BT81 388 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 PLA2G12AQ9BZM1 189 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 OR11A1Q9GZK7 315 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 SLC7A10Q9NS82 523 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 EXD2Q9NVH0 621 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 TMEM181Q9P2C4 612 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 TMEFF2Q9UIK5 374 aaPredicted RBP12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 TRAPPC4Q9Y296 219 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 SLC35A3Q9Y2D2 325 aa12.51□□□□□ -0.41
UPF3AP2-201ENST00000457924 FLVCR1Q9Y5Y0 555 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms