RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 HDHD5Q9BXW7 423 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 POTEKPQ9BYX7 375 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 KLHL4Q9C0H6 718 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 NSRP1Q9H0G5 558 aaKnown RBP20.66■□□□□ 0.9
CBX3-204ENST00000456948 CLEC4MQ9H2X3 399 aaPredicted RBP20.66■□□□□ 0.9
CBX3-204ENST00000456948 IKZF5Q9H5V7 419 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 BCO1Q9HAY6 547 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 RASSF1Q9NS23 344 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 SELENONQ9NZV5 590 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 IGHV3-15A0A0B4J1V0 119 aa20.65■□□□□ 0.9
CBX3-204ENST00000456948 ZNF724A8MTY0 619 aa20.65■□□□□ 0.9
CBX3-204ENST00000456948 GPR171O14626 319 aa20.65■□□□□ 0.9
CBX3-204ENST00000456948 CD1EP15812 388 aa20.65■□□□□ 0.9
CBX3-204ENST00000456948 MTPNP58546 118 aa20.65■□□□□ 0.9
CBX3-204ENST00000456948 PDK3Q15120 406 aa20.65■□□□□ 0.9
CBX3-204ENST00000456948 DHRS4L2Q6PKH6 230 aa20.65■□□□□ 0.9
CBX3-204ENST00000456948 ARL5BQ96KC2 179 aa20.65■□□□□ 0.9
CBX3-204ENST00000456948 ECSITQ9BQ95 431 aa20.65■□□□□ 0.9
CBX3-204ENST00000456948 OR11A1Q9GZK7 315 aa20.65■□□□□ 0.9
CBX3-204ENST00000456948 LOC100653049A0A140TA62 436 aa20.64■□□□□ 0.89
CBX3-204ENST00000456948 TMEM72A0PK05 275 aa20.64■□□□□ 0.89
CBX3-204ENST00000456948 A8MVM7 634 aa20.64■□□□□ 0.89
CBX3-204ENST00000456948 MRASO14807 208 aa20.64■□□□□ 0.89
CBX3-204ENST00000456948 SMAD9O15198 467 aaKnown RBP20.64■□□□□ 0.89
CBX3-204ENST00000456948 KRT34O76011 436 aa20.64■□□□□ 0.89
CBX3-204ENST00000456948 GPIP06744 558 aa20.64■□□□□ 0.89
CBX3-204ENST00000456948 ADRM1Q16186 407 aa20.64■□□□□ 0.89
CBX3-204ENST00000456948 GALNT5Q7Z7M9 940 aa20.64■□□□□ 0.89
CBX3-204ENST00000456948 PATL1Q86TB9 770 aaKnown RBP20.64■□□□□ 0.89
CBX3-204ENST00000456948 LRRC58Q96CX6 371 aa20.64■□□□□ 0.89
CBX3-204ENST00000456948 USB1Q9BQ65 265 aaKnown RBP20.64■□□□□ 0.89
CBX3-204ENST00000456948 PSD2Q9BQI7 771 aa20.64■□□□□ 0.89
CBX3-204ENST00000456948 GPATCH1Q9BRR8 931 aaKnown RBP20.64■□□□□ 0.89
CBX3-204ENST00000456948 TAPBPLQ9BX59 468 aa20.64■□□□□ 0.89
CBX3-204ENST00000456948 TRIM2Q9C040 744 aa20.64■□□□□ 0.89
CBX3-204ENST00000456948 KAT8Q9H7Z6 458 aaKnown RBP20.64■□□□□ 0.89
CBX3-204ENST00000456948 GPR52Q9Y2T5 361 aa20.64■□□□□ 0.89
CBX3-204ENST00000456948 AQP1P29972 269 aa20.63■□□□□ 0.89
CBX3-204ENST00000456948 IDUAP35475 653 aa20.63■□□□□ 0.89
CBX3-204ENST00000456948 KRTAP10-9P60411 292 aa20.63■□□□□ 0.89
CBX3-204ENST00000456948 CAPRIN1Q14444 709 aaKnown RBP20.63■□□□□ 0.89
CBX3-204ENST00000456948 NANOGP8Q6NSW7 305 aa20.63■□□□□ 0.89
CBX3-204ENST00000456948 SNX32Q86XE0 403 aa20.63■□□□□ 0.89
CBX3-204ENST00000456948 ZNF100Q8IYN0 542 aa20.63■□□□□ 0.89
CBX3-204ENST00000456948 OR8J3Q8NGG0 315 aa20.63■□□□□ 0.89
CBX3-204ENST00000456948 OR10A6Q8NH74 314 aa20.63■□□□□ 0.89
CBX3-204ENST00000456948 SLC26A7Q8TE54 656 aa20.63■□□□□ 0.89
CBX3-204ENST00000456948 DNAJA4Q8WW22 397 aaPredicted RBP20.63■□□□□ 0.89
CBX3-204ENST00000456948 RASSF5Q8WWW0 418 aa20.63■□□□□ 0.89
CBX3-204ENST00000456948 NANOGQ9H9S0 305 aa20.63■□□□□ 0.89
CBX3-204ENST00000456948 TMEM27Q9HBJ8 222 aa20.63■□□□□ 0.89
CBX3-204ENST00000456948 AP3M1Q9Y2T2 418 aa20.63■□□□□ 0.89
CBX3-204ENST00000456948 FBP2O00757 339 aa20.62■□□□□ 0.89
CBX3-204ENST00000456948 PRG2P13727 222 aa20.62■□□□□ 0.89
CBX3-204ENST00000456948 REP15Q6BDI9 236 aa20.62■□□□□ 0.89
CBX3-204ENST00000456948 CDH24Q86UP0 819 aa20.62■□□□□ 0.89
CBX3-204ENST00000456948 RANBP3LQ86VV4 465 aaPredicted RBP20.62■□□□□ 0.89
CBX3-204ENST00000456948 C10orf111Q8N326 155 aa20.62■□□□□ 0.89
CBX3-204ENST00000456948 STEAP2Q8NFT2 490 aa20.62■□□□□ 0.89
CBX3-204ENST00000456948 OR52E4Q8NGH9 312 aa20.62■□□□□ 0.89
CBX3-204ENST00000456948 RP9Q8TA86 221 aaKnown RBP20.62■□□□□ 0.89
CBX3-204ENST00000456948 C10orf82Q8WW14 230 aa20.62■□□□□ 0.89
CBX3-204ENST00000456948 OR10A4Q9H209 315 aa20.62■□□□□ 0.89
CBX3-204ENST00000456948 C12orf10Q9HB07 376 aa20.62■□□□□ 0.89
CBX3-204ENST00000456948 CHST2Q9Y4C5 530 aa20.62■□□□□ 0.89
CBX3-204ENST00000456948 TESMINQ9Y4I5 508 aa20.62■□□□□ 0.89
CBX3-204ENST00000456948 CSMD1Q96PZ7 3565 aa20.61■□□□□ 0.89
CBX3-204ENST00000456948 FAM221AA4D161 298 aa20.61■□□□□ 0.89
CBX3-204ENST00000456948 ELOA3DA6NLF2 546 aaPredicted RBP20.61■□□□□ 0.89
CBX3-204ENST00000456948 PNMTP11086 282 aa20.61■□□□□ 0.89
CBX3-204ENST00000456948 RGS8P57771 180 aaPredicted RBP20.61■□□□□ 0.89
CBX3-204ENST00000456948 P2RY6Q15077 328 aa20.61■□□□□ 0.89
CBX3-204ENST00000456948 ELOA3BQ3SY89 546 aa20.61■□□□□ 0.89
CBX3-204ENST00000456948 ERICH5Q6P6B1 374 aa20.61■□□□□ 0.89
CBX3-204ENST00000456948 C5orf46Q6UWT4 87 aa20.61■□□□□ 0.89
CBX3-204ENST00000456948 NUFIP2Q7Z417 695 aaKnown RBP20.61■□□□□ 0.89
CBX3-204ENST00000456948 NET1Q7Z628 596 aaPredicted RBP20.61■□□□□ 0.89
CBX3-204ENST00000456948 CPLX4Q7Z7G2 160 aa20.61■□□□□ 0.89
CBX3-204ENST00000456948 LSMEM1Q8N8F7 131 aa20.61■□□□□ 0.89
CBX3-204ENST00000456948 ELOA3Q8NG57 546 aa20.61■□□□□ 0.89
CBX3-204ENST00000456948 STK35Q8TDR2 534 aa20.61■□□□□ 0.89
CBX3-204ENST00000456948 WFIKKN1Q96NZ8 548 aa20.61■□□□□ 0.89
CBX3-204ENST00000456948 PARPBPQ9NWS1 579 aa20.61■□□□□ 0.89
CBX3-204ENST00000456948 TESQ9UGI8 421 aaKnown RBP20.61■□□□□ 0.89
CBX3-204ENST00000456948 ITGB1BP2Q9UKP3 347 aa20.61■□□□□ 0.89
CBX3-204ENST00000456948 NOSIPQ9Y314 301 aaKnown RBP20.61■□□□□ 0.89
CBX3-204ENST00000456948 IGKV3D-15A0A087WSY6 115 aa20.6■□□□□ 0.89
CBX3-204ENST00000456948 M0QX08 132 aa20.6■□□□□ 0.89
CBX3-204ENST00000456948 MFN2O95140 757 aa20.6■□□□□ 0.89
CBX3-204ENST00000456948 CNOT4O95628 575 aaKnown RBP20.6■□□□□ 0.89
CBX3-204ENST00000456948 IFNA14P01570 189 aa20.6■□□□□ 0.89
CBX3-204ENST00000456948 C8BP07358 591 aa20.6■□□□□ 0.89
CBX3-204ENST00000456948 PSMB1P20618 241 aaKnown RBP20.6■□□□□ 0.89
CBX3-204ENST00000456948 FPR1P21462 350 aa20.6■□□□□ 0.89
CBX3-204ENST00000456948 PCGF2P35227 344 aa20.6■□□□□ 0.89
CBX3-204ENST00000456948 ULK3Q6PHR2 472 aa20.6■□□□□ 0.89
CBX3-204ENST00000456948 PAQR6Q6TCH4 344 aa20.6■□□□□ 0.89
CBX3-204ENST00000456948 TFAP2EQ6VUC0 442 aa20.6■□□□□ 0.89
CBX3-204ENST00000456948 SPATA21Q7Z572 469 aa20.6■□□□□ 0.89
CBX3-204ENST00000456948 PTOV1Q86YD1 416 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms