RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 POMZP3Q6PJE2 187 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 B3GNT6Q6ZMB0 384 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 GDF7Q7Z4P5 450 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 C10orf67Q8IYJ2 551 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 UBQLNLQ8IYU4 475 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 FAM86B1Q8N7N1 296 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 ATP6V1C2Q8NEY4 427 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 OR5M9Q8NGP3 310 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 OR10D3Q8NH80 312 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 SMPDL3BQ92485 455 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 OSTF1Q92882 214 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 WNT2BQ93097 391 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 CPNE4Q96A23 557 aaPredicted RBP12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 HS6ST2Q96MM7 605 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 ZFP3Q96NJ6 502 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 ZNF426Q9BUY5 554 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 FNDC11Q9BVV2 318 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 TMEM185BQ9H7F4 350 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 MCTS1Q9ULC4 181 aaKnown RBP12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 SLC7A7Q9UM01 511 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 A4GNTQ9UNA3 340 aa12.86□□□□□ -0.35
HMGXB4-204ENST00000455359 EML6Q6ZMW3 1958 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 A0A1W2PRQ8 180 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 TCRBV3S1A0A5B6 114 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 DHRS12A0PJE2 317 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 EIF1BO60739 113 aaKnown RBP12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 RAP2AP10114 183 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 TFPIP10646 304 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 SFTPDP35247 375 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 IDUAP35475 653 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 TIMP3P35625 211 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 EIF1AXP47813 144 aaKnown RBP12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 AGFG1P52594 562 aaKnown RBP12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 SLC35A1P78382 337 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 DGCR6Q14129 220 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 TRAM2Q15035 370 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 SGCBQ16585 318 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 EIF2S3LQ2VIR3 472 aaKnown RBP12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 IQCCQ4KMZ1 466 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 EEF1A1P5Q5VTE0 462 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 C1orf146Q5VVC0 180 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 SPATA24Q86W54 205 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 PIK3C3Q8NEB9 887 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 ZHX1-C8orf76Q96EF9 292 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 OR5B2Q96R09 309 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 PIP5K1AQ99755 562 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 TM9SF2Q99805 663 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 TUBA1CQ9BQE3 449 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 YY1AP1Q9H869 796 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 ALKBH4Q9NXW9 302 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 TINAGQ9UJW2 476 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 MEMO1Q9Y316 297 aa12.85□□□□□ -0.35
HMGXB4-204ENST00000455359 IGKV1D-42A0A075B6H8 117 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 TRAV36DV7A0A075B6V5 113 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 CLCA1A8K7I4 914 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 SULT2B1O00204 365 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 TNFSF11O14788 317 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 FFAR1O14842 300 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 FZD7O75084 574 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 KRT36O76013 467 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 PRSS23O95084 383 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 AHSA1O95433 338 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 SYNGR4O95473 234 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 THY1P04216 161 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 CCNA2P20248 432 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 SHC1P29353 583 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 UQCRFS1P47985 274 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 DIO1P49895 249 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 VLDLRP98155 873 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 MYBPHQ13203 477 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 GK3PQ14409 553 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 C1orf140Q5VVS0 124 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 GTF2IRD2BQ6EKJ0 949 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 OR2A2Q6IF42 318 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 TTC33Q6PID6 262 aaPredicted RBP12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 TSEN54Q7Z6J9 526 aaKnown RBP12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 GTF2IRD2Q86UP8 949 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 TSPYL5Q86VY4 417 aaPredicted RBP12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 ZDHHC21Q8IVQ6 265 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 ADGRG5Q8IZF4 528 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 RNF113BQ8IZP6 322 aaKnown RBP12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 SLC43A2Q8N370 569 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 MFSD8Q8NHS3 518 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 PRR7Q8TB68 274 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 RNF217Q8TC41 542 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 UTP4Q969X6 686 aaKnown RBP12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 DHRS1Q96LJ7 313 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 DMRTA2Q96SC8 542 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 SEPHS2Q99611 448 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 KLHL4Q9C0H6 718 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 OR11A1Q9GZK7 315 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 COQ10BQ9H8M1 238 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 NMNAT1Q9HAN9 279 aaPredicted RBP12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 GP6Q9HCN6 339 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 CLCF1Q9UBD9 225 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 FAM215AQ9Y5M1 114 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 V9GYQ6 96 aa12.84□□□□□ -0.35
HMGXB4-204ENST00000455359 HELZ2Q9BYK8 2649 aaKnown RBP12.83□□□□□ -0.35
HMGXB4-204ENST00000455359 MBD3L4A6NDZ8 208 aaPredicted RBP12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 MBD3L3A6NE82 208 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms