RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 OMPP47874 163 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 LHX2P50458 406 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 IST1P53990 364 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 SYT14P1Q58G82 188 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 FGD3Q5JSP0 725 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 FAHD1Q6P587 224 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 FAM180AQ6UWF9 173 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 CD300LDQ6UXZ3 194 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 ZNF730Q6ZMV8 503 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 ESPNLQ6ZVH7 1005 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 OR52J3Q8NH60 311 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 GIPC3Q8TF64 312 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 FAR1Q8WVX9 515 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 DNAJC9Q8WXX5 260 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 DDIT4LQ96D03 193 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 ADGRG7Q96K78 797 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 GPR137Q96N19 417 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 PTDSS2Q9BVG9 487 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 DGCR6LQ9BY27 220 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 KRCC1Q9NPI7 259 aaPredicted RBP10.14□□□□□ -0.79
TRAF4-206ENST00000454852 NKX1-2Q9UD57 310 aaPredicted RBP10.14□□□□□ -0.79
TRAF4-206ENST00000454852 OAZ3Q9UMX2 235 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 TRAPPC4Q9Y296 219 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 TMEM5Q9Y2B1 443 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 RPH3AQ9Y2J0 694 aaPredicted RBP10.14□□□□□ -0.79
TRAF4-206ENST00000454852 U3KQV3 271 aa10.14□□□□□ -0.79
TRAF4-206ENST00000454852 PMS2P2O95744 297 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 BAG2O95816 211 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 HPRP00739 348 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 ADAP00813 363 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 MT-ATP6P00846 226 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 TSPAN19P0C672 248 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 CPN1P15169 458 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 BMP7P18075 431 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 FPR3P25089 353 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 GSSP48637 474 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 TDGF1P3P51864 188 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 CLDN18P56856 261 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 PPP2R2BQ00005 443 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 CRYZQ08257 329 aaKnown RBP10.13□□□□□ -0.79
TRAF4-206ENST00000454852 MFSD13AQ14CX5 517 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 TOMM20Q15388 145 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 ZNF74Q16587 644 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 ZNF239Q16600 458 aaKnown RBP10.13□□□□□ -0.79
TRAF4-206ENST00000454852 CTU2Q2VPK5 515 aaKnown RBP10.13□□□□□ -0.79
TRAF4-206ENST00000454852 ANKDD1AQ495B1 522 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 FAM69AQ5T7M9 428 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 OGFRL1Q5TC84 451 aaPredicted RBP10.13□□□□□ -0.79
TRAF4-206ENST00000454852 C1orf140Q5VVS0 124 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 PGBD2Q6P3X8 592 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 ARHGAP11AQ6P4F7 1023 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 TBPL2Q6SJ96 375 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 TMPPEQ6ZT21 453 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 ZER1Q7Z7L7 766 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 GGNQ86UU5 652 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 EPHX4Q8IUS5 362 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 NRMQ8IXM6 262 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 PACRGLQ8N7B6 248 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 OR10G2Q8NGC3 310 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 OR5M1Q8NGP8 315 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 MFSD8Q8NHS3 518 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 PIGXQ8TBF5 258 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 MIB2Q96AX9 1013 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 KLHL15Q96M94 604 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 C9orf16Q9BUW7 83 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 PRDM14Q9GZV8 571 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 DEFB127Q9H1M4 99 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 SEMA6AQ9H2E6 1030 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 SLC6A15Q9H2J7 730 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 USE1Q9NZ43 259 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 PDP1Q9P0J1 537 aaPredicted RBP10.13□□□□□ -0.79
TRAF4-206ENST00000454852 MGAT4BQ9UQ53 548 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 LIPGQ9Y5X9 500 aa10.13□□□□□ -0.79
TRAF4-206ENST00000454852 SPENQ96T58 3664 aaKnown RBP10.12□□□□□ -0.79
TRAF4-206ENST00000454852 ZC3H12DA2A288 527 aaKnown RBP10.12□□□□□ -0.79
TRAF4-206ENST00000454852 LIPT2A6NK58 231 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 OR10H3O60404 316 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 AHSA1O95433 338 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 BGLAPP02818 100 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 ASAH2BP0C7U1 165 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 IMPDH2P12268 514 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 ZNF23P17027 643 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 GSTM3P21266 225 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 SLC9A3P48764 834 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 CLDN15P56746 228 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 LSM11P83369 360 aaKnown RBP eCLIP10.12□□□□□ -0.791e-7■■■□□ 18.3
TRAF4-206ENST00000454852 H3F3AP84243 136 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 COX10Q12887 443 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 PPP1R8Q12972 351 aaKnown RBP10.12□□□□□ -0.79
TRAF4-206ENST00000454852 TSPAN31Q12999 210 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 MYBPHQ13203 477 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 LY6DQ14210 128 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 KDM4DQ6B0I6 523 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 PPP4R4Q6NUP7 873 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 RRM2BQ7LG56 351 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 PRICKLE2Q7Z3G6 844 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 SLC46A3Q7Z3Q1 461 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 CHERPQ8IWX8 916 aaKnown RBP10.12□□□□□ -0.79
TRAF4-206ENST00000454852 GHDCQ8N2G8 530 aa10.12□□□□□ -0.79
TRAF4-206ENST00000454852 PARP8Q8N3A8 854 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms