RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 CLDN8P56748 225 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 SRSF2Q01130 221 aaKnown RBP7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 TUSC1Q2TAM9 212 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 AP1ARQ63HQ0 302 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 OR7E24Q6IFN5 339 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 TNFAIP8L2Q6P589 184 aaPredicted RBP7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 CASP12Q6UXS9 341 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 IL17RELQ6ZVW7 336 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 GRINAQ7Z429 371 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 HOMEZQ8IX15 550 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 EIF1ADQ8N9N8 165 aaKnown RBP7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 OR4A15Q8NGL6 344 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 ZNF563Q8TA94 476 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 PROX1Q92786 737 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 RAB8BQ92930 207 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 TUBGCP3Q96CW5 907 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 ZHX1-C8orf76Q96EF9 292 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 BEX2Q9BXY8 128 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 EXOSC3Q9NQT5 275 aaKnown RBP7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 SLC17A5Q9NRA2 495 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 SLC7A10Q9NS82 523 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 ASIC5Q9NY37 505 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 SLC35A3Q9Y2D2 325 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 HDGFL3Q9Y3E1 203 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 WDR45Q9Y484 360 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 FLVCR1Q9Y5Y0 555 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 SPIN1Q9Y657 262 aaPredicted RBP7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 ATP23Q9Y6H3 246 aa7.73□□□□□ -1.17
DEPDC1B-202ENST00000453022 SLC35F4A4IF30 521 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 ATP6V1G2-DDX39BF2Z307 99 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 RNASET2O00584 256 aaKnown RBP7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 ANKRD28O15084 1053 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 SCN2BO60939 215 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 GUSBP08236 651 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 CSF3P09919 207 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 CCNA2P20248 432 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 USF1P22415 310 aaPredicted RBP7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 SERPINB5P36952 375 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 EFNA4P52798 201 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 OR2B6P58173 313 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 PHC1P78364 1004 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 EMX2Q04743 252 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 MST1LQ2TV78 715 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 TSPO2Q5TGU0 170 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 SAXO2Q658L1 398 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 CYB5R2Q6BCY4 276 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 ANKRD46Q86W74 232 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 DEPDC4Q8N2C3 294 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 C17orf78Q8N4C9 275 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 C1orf162Q8NEQ5 155 aaPredicted RBP7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 OR8J2Q8NGG1 315 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 KIF18AQ8NI77 898 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 TCP10LQ8TDR4 215 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 XAGE5Q8WWM1 108 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 OIT3Q8WWZ8 545 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 CNOT9Q92600 299 aaKnown RBP7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 ROPN1LQ96C74 230 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 SORCS2Q96PQ0 1159 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 SHARPINQ9H0F6 387 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 POLE3Q9NRF9 147 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 EXD2Q9NVH0 621 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 NOP53Q9NZM5 478 aaKnown RBP7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 TMEM181Q9P2C4 612 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 LPAR3Q9UBY5 353 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 DCTN4Q9UJW0 460 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 SLC9A8Q9Y2E8 581 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 AMDHD2Q9Y303 409 aa7.72□□□□□ -1.17
DEPDC1B-202ENST00000453022 TMED7-TICAM2A0A0A6YYA0 188 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 TLDC2A0PJX2 215 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 TMEM72A0PK05 275 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 ZC3H12DA2A288 527 aaKnown RBP7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 LMX1BO60663 402 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 BPGMP07738 259 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 CREB1P16220 341 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 APOBEC3AP31941 199 aaPredicted RBP7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 MAGEA8P43361 318 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 IDH2P48735 452 aaKnown RBP7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 CLK1P49759 484 aaKnown RBP7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 KCNJ10P78508 379 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 SLC17A1Q14916 467 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 SWI5Q1ZZU3 235 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 DMRTA1Q5VZB9 504 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 ARFGAP2Q8N6H7 521 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 ZIC4Q8N9L1 334 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 NEURL3Q96EH8 262 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 PPP1R36Q96LQ0 422 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 C19orf24Q9BVV8 132 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 PRR14Q9BWN1 585 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 CHODLQ9H9P2 273 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 FKRPQ9H9S5 495 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 LGALS13Q9UHV8 139 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 OSGIN1Q9UJX0 560 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 MOKQ9UQ07 419 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 TRAPPC4Q9Y296 219 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 TMED7Q9Y3B3 224 aa7.71□□□□□ -1.17
DEPDC1B-202ENST00000453022 HMGN4O00479 90 aa7.71□□□□□ -1.18
DEPDC1B-202ENST00000453022 ITM2AO43736 263 aa7.71□□□□□ -1.18
DEPDC1B-202ENST00000453022 AGR2O95994 175 aa7.71□□□□□ -1.18
DEPDC1B-202ENST00000453022 UQCRC2P22695 453 aa7.71□□□□□ -1.18
DEPDC1B-202ENST00000453022 FKBP2P26885 142 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms