RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 PCGF1Q9BSM1 259 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 EFCAB11Q9BUY7 163 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 ANGPTL4Q9BY76 406 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 ZCCHC4Q9H5U6 513 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 ZNF552Q9H707 407 aaPredicted RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 FGF20Q9NP95 211 aaPredicted RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 GPR173Q9NS66 373 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 UQCC1Q9NVA1 299 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 VPS29Q9UBQ0 182 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 STEAP1Q9UHE8 339 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 PCDHGA9Q9Y5G4 932 aaKnown RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 KLF2Q9Y5W3 355 aaPredicted RBP2.07□□□□□ -2.08
USP53-202ENST00000450251 V9GY05 133 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 FER1L6Q2WGJ9 1857 aa2.07□□□□□ -2.08
USP53-202ENST00000450251 COL1A2P08123 1366 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 PKD1L3Q7Z443 1732 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 TBC1D3DA0A087WVF3 549 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 TBC1D3IA0A087WXS9 549 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 TBC1D3EA0A087X179 549 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 TBC1D3KA0A087X1G2 549 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 MDFIC2A0A1B0GVS7 189 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 TCRBV21S2A2A0A5A6 115 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 TBC1D3FA6NER0 549 aaPredicted RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 OR51F1A6NGY5 319 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 DRGXA6NNA5 263 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 TBC1D3LB9A6J9 549 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 PRRT4C9JH25 899 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 F6UZH7 168 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 UBE2Q2LH0YL09 131 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 HAS3O00219 553 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 ITGB1BP1O14713 200 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 FMO6PO60774 539 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 WDR1O75083 606 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 PRSS23O95084 383 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 NTSR2O95665 410 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 RHOCP08134 193 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 USP17L7P0C7H9 530 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CLEC2LP0C7M8 214 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GAAP10253 952 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 NDUFV2P19404 249 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 HRH2P25021 359 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 ITPKBP27987 946 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 PBX3P40426 434 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 PTH2RP49190 550 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GSK3AP49840 483 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 EPHB3P54753 998 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 BIDP55957 195 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 TBX4P57082 545 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 YBEYP58557 167 aaPredicted RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 TAS2R30P59541 319 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 HERV-K104P61576 105 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 IL10RBQ08334 325 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 ATXN7L3Q14CW9 347 aaPredicted RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 DHCR24Q15392 516 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 NPY5RQ15761 445 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 RPE65Q16518 533 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 ELOA3BQ3SY89 546 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 NHLRC3Q5JS37 347 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 MANEALQ5VSG8 457 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CYB5R2Q6BCY4 276 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 TBC1D3CQ6IPX1 549 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 ADAM5Q6NVV9 412 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 DLK2Q6UY11 383 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 SPNS3Q6ZMD2 512 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 MBOAT1Q6ZNC8 495 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 Q6ZTK2 550 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GALNTL5Q7Z4T8 443 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 ABHD12BQ7Z5M8 362 aaPredicted RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 GLRX5Q86SX6 157 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.06□□□□□ -2.08
USP53-202ENST00000450251 TBC1D3Q8IZP1 549 aaPredicted RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 NLGN4XQ8N0W4 816 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 NLGN4YQ8NFZ3 816 aaPredicted RBP2.06□□□□□ -2.08
USP53-202ENST00000450251 ELOA3Q8NG57 546 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 OR9K2Q8NGE7 335 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 OR5L1Q8NGL2 311 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GPR119Q8TDV5 335 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 UBTD2Q8WUN7 234 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 OR5P2Q8WZ92 322 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 FOXJ1Q92949 421 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CCDC74AQ96AQ1 378 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 RASD2Q96D21 266 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 KIRREL1Q96J84 757 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 APOLD1Q96LR9 279 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 GPR21Q99679 349 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CCDC3Q9BQI4 270 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 TIMM29Q9BSF4 260 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 NDUFAF3Q9BU61 184 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 OR51I2Q9H344 312 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 SLC25A19Q9HC21 320 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 ADAP2Q9NPF8 381 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 POT1Q9NUX5 634 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 EVA1BQ9NVM1 165 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 MAP10Q9P2G4 905 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 OR12D3Q9UGF7 316 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 CPA4Q9UI42 421 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 IKZF2Q9UKS7 526 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 LHX6Q9UPM6 363 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 RASD1Q9Y272 281 aa2.06□□□□□ -2.08
USP53-202ENST00000450251 FNDC3AQ9Y2H6 1198 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms