RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 GLTPD2A6NH11 291 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 ADM5C9JUS6 153 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 CACNB4O00305 520 aaPredicted RBP7.98□□□□□ -1.13
LSM5-208ENST00000450169 FLRT2O43155 660 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 FGF16O43320 207 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 RDH16O75452 317 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 ETHE1O95571 254 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 IFNGP01579 166 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 CDH4P55283 916 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 NRG3P56975 720 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 TBX4P57082 545 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 POU4F2Q12837 409 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 NAE1Q13564 534 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 VGLL4Q14135 290 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 DEFB115Q30KQ5 88 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 GFOD2Q3B7J2 385 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 ZNF792Q3KQV3 632 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 ACSM3Q53FZ2 586 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 FAM111BQ6SJ93 734 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 UBE2R2Q712K3 238 aaPredicted RBP7.98□□□□□ -1.13
LSM5-208ENST00000450169 MAMDC2Q7Z304 686 aaPredicted RBP7.98□□□□□ -1.13
LSM5-208ENST00000450169 GTPBP8Q8N3Z3 284 aaPredicted RBP7.98□□□□□ -1.13
LSM5-208ENST00000450169 MORN4Q8NDC4 146 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 OR4A4PQ8NGN8 299 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 PAQR8Q8TEZ7 354 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 CA5BP1Q8WTZ4 195 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 ING5Q8WYH8 240 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 RAB3CQ96E17 227 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 CPNE2Q96FN4 548 aaPredicted RBP7.98□□□□□ -1.13
LSM5-208ENST00000450169 MARS2Q96GW9 593 aaKnown RBP7.98□□□□□ -1.13
LSM5-208ENST00000450169 TMEM19Q96HH6 336 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 INSM2Q96T92 566 aaPredicted RBP7.98□□□□□ -1.13
LSM5-208ENST00000450169 TBX5Q99593 518 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 TIMP4Q99727 224 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 TRMT61BQ9BVS5 477 aaKnown RBP7.98□□□□□ -1.13
LSM5-208ENST00000450169 ZCCHC2Q9C0B9 1178 aaKnown RBP7.98□□□□□ -1.13
LSM5-208ENST00000450169 MAN2C1Q9NTJ4 1040 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 IL17CQ9P0M4 197 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 RCC2Q9P258 522 aaKnown RBP7.98□□□□□ -1.13
LSM5-208ENST00000450169 CA14Q9ULX7 337 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 TNFSF18Q9UNG2 199 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 MOKQ9UQ07 419 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 ASF1AQ9Y294 204 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 CHD5Q8TDI0 1954 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 TRAV1-2A0A0B4J238 106 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 A0A1W2PQH9 124 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 J3QRE1 110 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 SURF4O15260 269 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 TCAPO15273 167 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 CPT2P23786 658 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 TIA1P31483 386 aaKnown RBP eCLIP7.97□□□□□ -1.13
LSM5-208ENST00000450169 CCR7P32248 378 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 PMELP40967 661 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 PCP4P48539 62 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 F2RL1P55085 397 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 RPS26P62854 115 aaKnown RBP7.97□□□□□ -1.13
LSM5-208ENST00000450169 SEMG2Q02383 582 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 IRF4Q15306 451 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 RPE65Q16518 533 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 LBHQ53QV2 105 aaPredicted RBP7.97□□□□□ -1.13
LSM5-208ENST00000450169 NKAPLQ5M9Q1 402 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 NCMAPQ5T1S8 102 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 HENMT1Q5T8I9 393 aaKnown RBP7.97□□□□□ -1.13
LSM5-208ENST00000450169 LIPJQ5W064 366 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 C6orf120Q7Z4R8 191 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 DPPA2Q7Z7J5 298 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 C11orf96Q7Z7L8 435 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 TMPRSS11BQ86T26 416 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 MON1AQ86VX9 555 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 BEST3Q8N1M1 668 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 ZNF614Q8N883 585 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 TEX19Q8NA77 164 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 C17orf47Q8NEP4 570 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 STOML3Q8TAV4 291 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 S100PBPQ96BU1 408 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 PPCDCQ96CD2 204 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 CMTM3Q96MX0 182 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 TEAD3Q99594 435 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 NRIP2Q9BQI9 281 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 ZDHHC5Q9C0B5 715 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 OR51I1Q9H343 314 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 PRDM13Q9H4Q3 707 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 MMP26Q9NRE1 261 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 H2AFY2Q9P0M6 372 aaPredicted RBP7.97□□□□□ -1.13
LSM5-208ENST00000450169 PIN4Q9Y237 131 aaKnown RBP7.97□□□□□ -1.13
LSM5-208ENST00000450169 PATJQ8NI35 1801 aa7.97□□□□□ -1.13
LSM5-208ENST00000450169 A0A0A6YYC8 382 aaPredicted RBP7.96□□□□□ -1.13
LSM5-208ENST00000450169 A0A0D9SEW6 157 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 A0A1W2PPK0 400 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 DAPL1A0PJW8 107 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 BTBD17A6NE02 478 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 OR2AT4A6NND4 320 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 C19orf81C9J6K1 198 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 I3L1I5 382 aaPredicted RBP7.96□□□□□ -1.13
LSM5-208ENST00000450169 M0R3H8 397 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 SOCS6O14544 535 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 MT-ND5P03915 603 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 RHOP08100 348 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 ZNF286BP0CG31 522 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 AVPR2P30518 371 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms