RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 FGF4P08620 206 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 CDKN2BP42772 138 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF133P52736 654 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 CASP7P55210 303 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 PRAMEF9Q5VWM5 478 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 PRR27Q6MZM9 219 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 A0A1B0GV72 72 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 KRBA1A5PL33 1030 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 RFPL4AA6NLU0 287 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 YDJCA8MPS7 323 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 UMAD1C9J7I0 102 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 RFPL4AL1F8VTS6 287 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 TRIM77I1YAP6 450 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 TTRP02766 147 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 GSCP56915 257 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 DSC2Q02487 901 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 PLPP4Q5VZY2 271 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 EID2Q8N6I1 236 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 CDS1Q92903 461 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 KIRREL1Q96J84 757 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 ACO2Q99798 780 aaKnown RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 CCDC88AQ3V6T2 1871 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 LRRC10BA6NIK2 292 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 MSI1O43347 362 aaKnown RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 PDGFAP04085 211 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 APEX1P27695 318 aaKnown RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 SFTPDP35247 375 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF626Q68DY1 528 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 RNF175Q8N4F7 328 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 NLGN4YQ8NFZ3 816 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 PRR11Q96HE9 360 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 OR10C1Q96KK4 312 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 TMEM175Q9BSA9 504 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 TRAPPC2LQ9UL33 140 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 TTC37Q6PGP7 1564 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 SLC15A5A6NIM6 579 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 TNFRSF10AO00220 468 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 FOXE1O00358 373 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 SLITRK3O94933 977 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 UBE2IP63279 158 aaKnown RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 GTF2BQ00403 316 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF551Q7Z340 670 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 OR4F15Q8NGB8 312 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 OR52P1PQ8NH57 321 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 FAM103A1Q9BTL3 118 aaKnown RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 DERL2Q9GZP9 239 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 EGLN3Q9H6Z9 239 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 TAC3Q9UHF0 121 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 STRAPQ9Y3F4 350 aaKnown RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 KLF11O14901 512 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 NTSR2O95665 410 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 ACP5P13686 325 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 TACR1P25103 407 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 CTXN1P60606 82 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 IL24Q13007 206 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 ETFDHQ16134 617 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 VARS2Q5ST30 1063 aaKnown RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 DBF4BQ8NFT6 615 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 EID2BQ96D98 161 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 ERVMER34-1Q9H9K5 563 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 LAMP3Q9UQV4 416 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 TRAV20A0A0B4J274 112 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 NDUFB2O95178 105 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 DRD2P14416 443 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 FBLP22087 321 aaKnown RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 WNT7BP56706 349 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 SIM1P81133 766 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 DHODHQ02127 395 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 CPEB3Q8NE35 698 aaKnown RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF566Q969W8 418 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 GPA33Q99795 319 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 ACTR3CQ9C0K3 210 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-202ENST00000448238 PLK3Q9H4B4 646 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 NANOGQ9H9S0 305 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 EDDM13A0A1B0GTR0 161 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF727A8MUV8 499 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 CDK2AP1O14519 115 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 SPINT2O43291 252 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 DNAJB13P59910 316 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 PDZD11Q5EBL8 140 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 C12orf29Q8N999 325 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 CNIH3Q8TBE1 160 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 PTDSS2Q9BVG9 487 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 POM121CA8CG34 1229 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 M0R1X1 148 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 MYF6P23409 242 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 HAGHQ16775 308 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 ABHD17BQ5VST6 288 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 ALKAL2Q6UX46 152 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 MDGA2Q7Z553 956 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 LNX1Q8TBB1 728 aaPredicted RBP8.4□□□□□ -1.06
NIPBL-202ENST00000448238 STACQ99469 402 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 LIN28AQ9H9Z2 209 aaKnown RBP8.4□□□□□ -1.06
NIPBL-202ENST00000448238 ARNT2Q9HBZ2 717 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 OR1A1Q9P1Q5 309 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 NRKQ7Z2Y5 1582 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 LRRIQ1Q96JM4 1722 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 LGALS8O00214 317 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 CHRM4P08173 479 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 HYAL2Q12891 473 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms