RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 OR2B2Q9GZK3 357 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 PRORYQ9H606 182 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 KRT84Q9NSB2 600 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 C20orf141Q9NUB4 165 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 TUBD1Q9UJT1 453 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 TMEM5Q9Y2B1 443 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 ORC6Q9Y5N6 252 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 SPIN1Q9Y657 262 aaPredicted RBP17.66■□□□□ 0.42
SGCE-207ENST00000447873 ACACBO00763 2458 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 PIEZO2Q9H5I5 2752 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 OR2M5A3KFT3 312 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 ZNF208O43345 1280 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 ADAP00813 363 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 IL11P20809 199 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 ELK4P28324 431 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 GPR4P46093 362 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 CTBP2P56545 445 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 EGR4Q05215 589 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 SELENBP1Q13228 472 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 WIPI1Q5MNZ9 446 aaPredicted RBP17.65■□□□□ 0.42
SGCE-207ENST00000447873 KDM4DQ6B0I6 523 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 C3orf33Q6P1S2 294 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 MEX3DQ86XN8 651 aaKnown RBP17.65■□□□□ 0.42
SGCE-207ENST00000447873 FAM109AQ8N4B1 249 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 GNPDA2Q8TDQ7 276 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 DDIT4LQ96D03 193 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 BPIFA2Q96DR5 249 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 UBL7Q96S82 380 aaPredicted RBP17.65■□□□□ 0.42
SGCE-207ENST00000447873 DGCR6LQ9BY27 220 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 ADNPQ9H2P0 1102 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 ZNF71Q9NQZ8 489 aaPredicted RBP17.65■□□□□ 0.42
SGCE-207ENST00000447873 QPCTLQ9NXS2 382 aa17.65■□□□□ 0.42
SGCE-207ENST00000447873 ZC3H12DA2A288 527 aaKnown RBP17.64■□□□□ 0.41
SGCE-207ENST00000447873 ENO4A6NNW6 628 aa17.64■□□□□ 0.41
SGCE-207ENST00000447873 EFNA2O43921 213 aa17.64■□□□□ 0.41
SGCE-207ENST00000447873 ALDH6A1Q02252 535 aaKnown RBP17.64■□□□□ 0.41
SGCE-207ENST00000447873 C5orf46Q6UWT4 87 aa17.64■□□□□ 0.41
SGCE-207ENST00000447873 IZUMO2Q6UXV1 221 aa17.64■□□□□ 0.41
SGCE-207ENST00000447873 GALNT5Q7Z7M9 940 aa17.64■□□□□ 0.41
SGCE-207ENST00000447873 STK35Q8TDR2 534 aa17.64■□□□□ 0.41
SGCE-207ENST00000447873 KTI12Q96EK9 354 aaPredicted RBP17.64■□□□□ 0.41
SGCE-207ENST00000447873 SFXN2Q96NB2 322 aa17.64■□□□□ 0.41
SGCE-207ENST00000447873 OR11A1Q9GZK7 315 aa17.64■□□□□ 0.41
SGCE-207ENST00000447873 PAPOLBQ9NRJ5 636 aaKnown RBP17.64■□□□□ 0.41
SGCE-207ENST00000447873 TMEFF2Q9UIK5 374 aaPredicted RBP17.64■□□□□ 0.41
SGCE-207ENST00000447873 POFUT2Q9Y2G5 429 aa17.64■□□□□ 0.41
SGCE-207ENST00000447873 ATMQ13315 3056 aa17.64■□□□□ 0.41
SGCE-207ENST00000447873 HTR3EA5X5Y0 456 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 H3BML4 177 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 CELA3AP09093 270 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 SAGP10523 405 aaPredicted RBP17.63■□□□□ 0.41
SGCE-207ENST00000447873 TFPIP10646 304 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 PEPDP12955 493 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 ZNF24P17028 368 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 FKBP2P26885 142 aaKnown RBP17.63■□□□□ 0.41
SGCE-207ENST00000447873 RAD23AP54725 363 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 AQP4P55087 323 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 SLC10A1Q14973 349 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 RNFT1Q5M7Z0 435 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 TMPRSS11FQ6ZWK6 438 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 C10orf53Q8N6V4 93 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 SLC25A43Q8WUT9 341 aaPredicted RBP17.63■□□□□ 0.41
SGCE-207ENST00000447873 DNAJC9Q8WXX5 260 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 SGTBQ96EQ0 304 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 UCK2Q9BZX2 261 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 TMEM185BQ9H7F4 350 aa17.63■□□□□ 0.41
SGCE-207ENST00000447873 SMPD3Q9NY59 655 aaPredicted RBP17.63■□□□□ 0.41
SGCE-207ENST00000447873 TPRP12270 2363 aaKnown RBP17.63■□□□□ 0.41
SGCE-207ENST00000447873 MED12Q93074 2177 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 TRAV36DV7A0A075B6V5 113 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 TFECO14948 347 aaPredicted RBP17.62■□□□□ 0.41
SGCE-207ENST00000447873 MITFO75030 526 aaPredicted RBP17.62■□□□□ 0.41
SGCE-207ENST00000447873 NPIPB7O75200 414 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 CH25HO95992 272 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 IGF2P01344 180 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 MAKP20794 623 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 GSTM3P21266 225 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 FPR3P25089 353 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 RPS5P46782 204 aaKnown RBP17.62■□□□□ 0.41
SGCE-207ENST00000447873 B3GALT5-AS1P59052 145 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 TSPAN31Q12999 210 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 RFX4Q33E94 735 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 PLEKHN1Q494U1 663 aaPredicted RBP17.62■□□□□ 0.41
SGCE-207ENST00000447873 SYT14P1Q58G82 188 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 C1orf140Q5VVS0 124 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 RELTQ969Z4 430 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 GPA33Q99795 319 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 ZNF337Q9Y3M9 751 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 EFCAB9A8MZ26 197 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 H0YJX3 145 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 AHSA1O95433 338 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 CDH2P19022 906 aaPredicted RBP17.62■□□□□ 0.41
SGCE-207ENST00000447873 GSSP48637 474 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 COX10Q12887 443 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 C1QL3Q5VWW1 255 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 SLC6A19Q695T7 634 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 RPUSD3Q6P087 351 aaKnown RBP17.62■□□□□ 0.41
SGCE-207ENST00000447873 KLHL17Q6TDP4 642 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 TAAR8Q969N4 342 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 DNAJA3Q96EY1 480 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms