RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 A0A1B0GWA3 101 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 OR5K3A6NET4 321 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 HPXP02790 462 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 GJA4P35212 333 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 HCCSP53701 268 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 ID2Q02363 134 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 PUDPQ08623 228 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 GRAMD2AQ8IUY3 354 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 OR11G2Q8NGC1 345 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 OR52E2Q8NGJ4 325 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 CNOT9Q92600 299 aaKnown RBP17.57■□□□□ 0.4
SDCBP-204ENST00000447182 ZMYND19Q96E35 227 aaPredicted RBP17.57■□□□□ 0.4
SDCBP-204ENST00000447182 OR14A2Q96R54 314 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 ORAI3Q9BRQ5 295 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 TWSG1Q9GZX9 223 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 FGF22Q9HCT0 170 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 TBC1D29Q9UFV1 150 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 TRBV2A0A0J9YWF9 115 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 NAP1L6A6NFF2 107 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 LRRC72A6NJI9 287 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 ZNF879B4DU55 563 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 GPRIN2O60269 458 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 CTSVO60911 334 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 ECDO95905 644 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-204ENST00000447182 NGFRP08138 427 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 ENPP1P22413 925 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 CCR9P51686 369 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 PRICKLE4Q2TBC4 344 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 ELFN2Q5R3F8 820 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 ABHD13Q7L211 337 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 SLC35F2Q8IXU6 374 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 ARL14Q8N4G2 192 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 EID2Q8N6I1 236 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 LRRC20Q8TCA0 184 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 DACT3Q96B18 629 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-204ENST00000447182 LCORQ96JN0 433 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-204ENST00000447182 ERMAPQ96PL5 475 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-204ENST00000447182 RBP7Q96R05 134 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 OR2M4Q96R27 311 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 SPRTNQ9H040 489 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-204ENST00000447182 SRMSQ9H3Y6 488 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 IL21RQ9HBE5 538 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 OBP2AQ9NY56 170 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 RPS6KB2Q9UBS0 482 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 A0A1W2PQU0 124 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 SCAMP1O15126 338 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 EML2O95834 649 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 SOX9P48436 509 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 MGAT2Q10469 447 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 KIR2DS3Q14952 304 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 POU4F3Q15319 338 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 FAM199XQ6PEV8 388 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-204ENST00000447182 PSRC1Q6PGN9 363 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-204ENST00000447182 NLRC3Q7RTR2 1065 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 FAM71CQ8NEG0 241 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 OR2T35Q8NGX2 323 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 OR14A16Q8NHC5 309 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 RPS4Y2Q8TD47 263 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 DOK4Q8TEW6 326 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 C1QTNF7Q9BXJ2 289 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 TRIM2Q9C040 744 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 HRASLSQ9HDD0 168 aa17.56■□□□□ 0.4
SDCBP-204ENST00000447182 GXYLT2A0PJZ3 443 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 PRSS38A1L453 326 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 GABARAPH6UMI1 98 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 MAGEB4O15481 346 aaPredicted RBP17.55■□□□□ 0.4
SDCBP-204ENST00000447182 FGF17O60258 216 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 LDB3O75112 727 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 GPR75O95800 540 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 HIST1H1CP16403 213 aaKnown RBP17.55■□□□□ 0.4
SDCBP-204ENST00000447182 SRMP19623 302 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 PSMB1P20618 241 aaKnown RBP17.55■□□□□ 0.4
SDCBP-204ENST00000447182 SSTR2P30874 369 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 LCN1P31025 176 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 GABRA3P34903 492 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 ACAA2P42765 397 aaKnown RBP17.55■□□□□ 0.4
SDCBP-204ENST00000447182 LINC00114Q6XXX2 140 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 C12orf76Q8N812 135 aaPredicted RBP17.55■□□□□ 0.4
SDCBP-204ENST00000447182 LSMEM1Q8N8F7 131 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 SPERTQ8NA61 448 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 CAMKVQ8NCB2 501 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 SDR9C7Q8NEX9 313 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 SNX33Q8WV41 574 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 HOXB13Q92826 284 aaPredicted RBP17.55■□□□□ 0.4
SDCBP-204ENST00000447182 FGF13Q92913 245 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 TTTY10Q9BZA0 68 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 CXXC1Q9P0U4 656 aaPredicted RBP17.55■□□□□ 0.4
SDCBP-204ENST00000447182 PILRAQ9UKJ1 303 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 SCN2AQ99250 2005 aa17.55■□□□□ 0.4
SDCBP-204ENST00000447182 A0A1B0GUH1 482 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 GMDSO60547 372 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 NKX2-2O95096 273 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 NDUFB2O95178 105 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 EDNRAP25101 427 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 MAT2AP31153 395 aaKnown RBP17.54■□□□□ 0.4
SDCBP-204ENST00000447182 SELENOPP49908 381 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 AP3S2P59780 193 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 ILF3Q12906 894 aaKnown RBP eCLIP17.54■□□□□ 0.4
SDCBP-204ENST00000447182 RUNX3Q13761 415 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 METTL11BQ5VVY1 283 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms