RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 RNPS1Q15287 305 aaKnown RBP13.21□□□□□ -0.29
HDAC4-204ENST00000446876 OR8J3Q8NGG0 315 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 DDIT4LQ96D03 193 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 LURAP1Q96LR2 239 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 ZNF607Q96SK3 696 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 PSD2Q9BQI7 771 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 NSRP1Q9H0G5 558 aaKnown RBP13.21□□□□□ -0.29
HDAC4-204ENST00000446876 MCCC2Q9HCC0 563 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 GLRX2Q9NS18 164 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 GMPR2Q9P2T1 348 aaKnown RBP13.21□□□□□ -0.29
HDAC4-204ENST00000446876 HDGFL3Q9Y3E1 203 aa13.21□□□□□ -0.29
HDAC4-204ENST00000446876 GMNCA6NCL1 334 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 M0QX08 132 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 M0R3H8 397 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 ZNF208O43345 1280 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 SNX3O60493 162 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 CYTIPO60759 359 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 CCDC22O60826 627 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 SERPINB7O75635 380 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 POU2F1P14859 743 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 EDNRAP25101 427 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 RGS8P57771 180 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-204ENST00000446876 RASGEF1BQ0VAM2 473 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 VMACQ2NL98 169 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 TMEM201Q5SNT2 666 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 GTF2IRD2BQ6EKJ0 949 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 ABLIM2Q6H8Q1 611 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.2□□□□□ -0.3
HDAC4-204ENST00000446876 CPLX4Q7Z7G2 160 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 ATG4DQ86TL0 474 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-204ENST00000446876 GTF2IRD2Q86UP8 949 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 TMEM200AQ86VY9 491 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 CALHM3Q86XJ0 350 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 CCDC103Q8IW40 242 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 SLC43A2Q8N370 569 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 PCYOX1LQ8NBM8 494 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 GPR32P1Q8NGA4 272 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 RP9Q8TA86 221 aaKnown RBP13.2□□□□□ -0.3
HDAC4-204ENST00000446876 TAMM41Q96BW9 452 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 ECSITQ9BQ95 431 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 GPATCH1Q9BRR8 931 aaKnown RBP13.2□□□□□ -0.3
HDAC4-204ENST00000446876 PLSCR4Q9NRQ2 329 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 TMEM181Q9P2C4 612 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 KLHL9Q9P2J3 617 aa13.2□□□□□ -0.3
HDAC4-204ENST00000446876 A0A1B0GWA3 101 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 PRORSD1PA6NEY8 169 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 CCT8L1PA6NM43 557 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 TMEM229AB2RXF0 380 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 AIM2O14862 343 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 TPST2O60704 377 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 YES1P07947 543 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 PTNP21246 168 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 PEX19P40855 299 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 CLK1P49759 484 aaKnown RBP13.19□□□□□ -0.3
HDAC4-204ENST00000446876 CRYBA2P53672 197 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 DUSP7Q16829 419 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 ANKRD34AQ69YU3 496 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 TFAP2EQ6VUC0 442 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 FAM222BQ8WU58 562 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 SLC35B4Q969S0 331 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 SH3GL1Q99961 368 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 KLHL4Q9C0H6 718 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 MYLK2Q9H1R3 596 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 BCO1Q9HAY6 547 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 SLC24A3Q9HC58 644 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 GID8Q9NWU2 228 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 KLHL28Q9NXS3 571 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 SLC13A4Q9UKG4 626 aa13.19□□□□□ -0.3
HDAC4-204ENST00000446876 SH3D21A4FU49 640 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 ZNF716A6NP11 495 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 NPPAP01160 153 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 CD247P20963 164 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 FPR1P21462 350 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 IDUAP35475 653 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 UGT2B10P36537 528 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 NCALDP61601 193 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 CEACAM7Q14002 265 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 OR7A5Q15622 319 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 P3H2Q8IVL5 708 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 SLC30A8Q8IWU4 369 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 OR52E4Q8NGH9 312 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 OR4D11Q8NGI4 311 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 VANGL1Q8TAA9 524 aaPredicted RBP13.18□□□□□ -0.3
HDAC4-204ENST00000446876 NRGNQ92686 78 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 ZHX1-C8orf76Q96EF9 292 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 ZNF583Q96ND8 569 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 ARHGDIGQ99819 225 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 CMTM6Q9NX76 183 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 ELOVL5Q9NYP7 299 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 RPS6KB2Q9UBS0 482 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 TESMINQ9Y4I5 508 aa13.18□□□□□ -0.3
HDAC4-204ENST00000446876 LIPT2A6NK58 231 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 ELOA3DA6NLF2 546 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-204ENST00000446876 A6NNC1 897 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 A8MVM7 634 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 FAM220BPB1ANY3 271 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 C16orf97H3BN30 126 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 CTAG2O75638 210 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 AKR7A3O95154 331 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 LGI1O95970 557 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms