RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 PPP1R3DO95685 299 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 CDK2P24941 298 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 EDNRAP25101 427 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 RPS11P62280 158 aaKnown RBP eCLIP12.88□□□□□ -0.35
VPS52-212ENST00000445902 ELAVL2Q12926 359 aaKnown RBP12.88□□□□□ -0.35
VPS52-212ENST00000445902 METTL3Q86U44 580 aaKnown RBP12.88□□□□□ -0.35
VPS52-212ENST00000445902 VN1R2Q8NFZ6 395 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 ZNF461Q8TAF7 563 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 OTUB2Q96DC9 234 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 TSNAXQ99598 290 aaKnown RBP12.88□□□□□ -0.35
VPS52-212ENST00000445902 VN1R3Q9BXE9 311 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 ZDHHC5Q9C0B5 715 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 COA4Q9NYJ1 87 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 ZNF230Q9UIE0 474 aaPredicted RBP12.88□□□□□ -0.35
VPS52-212ENST00000445902 ARID1BQ8NFD5 2236 aaPredicted RBP12.88□□□□□ -0.35
VPS52-212ENST00000445902 NAP1L6A6NFF2 107 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 NEDD8-MDP1E9PL57 170 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 POP7O75817 140 aaKnown RBP12.88□□□□□ -0.35
VPS52-212ENST00000445902 STARP49675 285 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 PRR5P85299 388 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 SCRN3Q0VDG4 424 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 STX4Q12846 297 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 GUCA2BQ16661 112 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 ASPGQ86U10 573 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 GJD3Q8N144 294 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 OR2AK2Q8NG84 335 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 OR5T2Q8NGG2 359 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 HS6ST2Q96MM7 605 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 ZNF75AQ96N20 296 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 GPR174Q9BXC1 333 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 SYNPO2LQ9H987 977 aa12.88□□□□□ -0.35
VPS52-212ENST00000445902 MRPL17Q9NRX2 175 aaKnown RBP12.88□□□□□ -0.35
VPS52-212ENST00000445902 TMEM272A0A1B0GTI8 110 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 SYT5O00445 386 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 ADAMTS4O75173 837 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 F12P00748 615 aaPredicted RBP12.87□□□□□ -0.35
VPS52-212ENST00000445902 CTSLP07711 333 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 TYRP14679 529 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 SRMP19623 302 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 MPGP29372 298 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 METAP1P53582 386 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 PLA2G7Q13093 441 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 HFEQ30201 348 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 OR4C11Q6IEV9 310 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 ZNF547Q8IVP9 402 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 DNAAF1Q8NEP3 725 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 NUP43Q8NFH3 380 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 CMSS1Q9BQ75 279 aaKnown RBP12.87□□□□□ -0.35
VPS52-212ENST00000445902 ZNF559Q9BR84 538 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 WDR13Q9H1Z4 485 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 FN3KQ9H479 309 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 PLEKHA1Q9HB21 404 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 NRIP3Q9NQ35 241 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 ZNF275Q9NSD4 429 aaPredicted RBP12.87□□□□□ -0.35
VPS52-212ENST00000445902 USP36Q9P275 1121 aaKnown RBP12.87□□□□□ -0.35
VPS52-212ENST00000445902 ATG4BQ9Y4P1 393 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 MAN2B1O00754 1011 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 TBX19O60806 448 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 LATS1O95835 1130 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 CYBAP13498 195 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 GABRR2P28476 465 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 CTGFP29279 349 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 GRPRP30550 384 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 RAB13P51153 203 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 TNFRSF17Q02223 184 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 ATXN7L3Q14CW9 347 aaPredicted RBP12.87□□□□□ -0.35
VPS52-212ENST00000445902 CDK5R1Q15078 307 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 LRRC37A5PQ49AS3 106 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 YOD1Q5VVQ6 348 aaPredicted RBP12.87□□□□□ -0.35
VPS52-212ENST00000445902 FAM46CQ5VWP2 391 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 LCTLQ6UWM7 567 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 TMEM25Q86YD3 366 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 PUSL1Q8N0Z8 303 aaKnown RBP12.87□□□□□ -0.35
VPS52-212ENST00000445902 SMIM19Q96E16 107 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 MNTQ99583 582 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 CHST6Q9GZX3 395 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 AICDAQ9GZX7 198 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 TMEM185BQ9H7F4 350 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 FOXJ3Q9UPW0 622 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 IFITM5A6NNB3 132 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 SNRPGP15A8MWD9 76 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 LINC00587B1AMM8 73 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 C4orf51C9J302 202 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 PIN1P1O15428 100 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 RASGRP1O95267 797 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 SERPINA3P01011 423 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 CD53P19397 219 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 DPP4P27487 766 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 KCNJ3P48549 501 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 MEOX2P50222 304 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 LUMP51884 338 aaPredicted RBP12.87□□□□□ -0.35
VPS52-212ENST00000445902 PCGF3Q3KNV8 242 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 C4orf46Q504U0 113 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 TSSK4Q6SA08 328 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 LDLRAD3Q86YD5 345 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 TEX19Q8NA77 164 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 COL26A1Q96A83 441 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 S100A16Q96FQ6 103 aaKnown RBP12.87□□□□□ -0.35
VPS52-212ENST00000445902 FAM83CQ9BQN1 747 aa12.87□□□□□ -0.35
VPS52-212ENST00000445902 CMC2Q9NRP2 79 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms