RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 NDUFA7O95182 113 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 LSM8O95777 96 aaKnown RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 SLC25A27O95847 323 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 AGTP01019 485 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 PAEPP09466 180 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 KRTAP1-4P0C5Y4 121 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 SLC35E2P0CK97 266 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 RALAP11233 206 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 PGAM2P15259 253 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 FUT1P19526 365 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 GLRA2P23416 452 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 NF2P35240 595 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 COILP38432 576 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 MDH1P40925 334 aaKnown RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 MDH2P40926 338 aaKnown RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 MAGEA9P43362 315 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 ALDH3B2P48448 385 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 PLTPP55058 493 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 SLC26A5P58743 744 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 ERVPABLB-1P60509 514 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 HERVK_113P63132 956 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 ERVK-8P63133 956 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 MRPS6P82932 125 aaKnown RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 ZP4Q12836 540 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 TFDP1Q14186 410 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 MXD4Q14582 209 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 UAP1Q16222 522 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 RNF212Q495C1 297 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 TTC31Q49AM3 519 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 SLC39A4Q6P5W5 647 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 ZCCHC12Q6PEW1 402 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 HACD2Q6Y1H2 254 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 TRMT10CQ7L0Y3 403 aaKnown RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 DEFB132Q7Z7B7 95 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 CCDC50Q8IVM0 306 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 C10orf67Q8IYJ2 551 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 MCOLN2Q8IZK6 566 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 CENPSQ8N2Z9 138 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 HDDC3Q8N4P3 179 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 PRELID2Q8N945 189 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 Q8N9G6 341 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 FAM71CQ8NEG0 241 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 OR56B1Q8NGI3 324 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 MCHR2Q969V1 340 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 NCLNQ969V3 563 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 SNF8Q96H20 258 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 ANKRD36BP1Q96IX9 119 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 C11orf70Q9BRQ4 267 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 ERVK-6Q9BXR3 956 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 NMNAT2Q9BZQ4 307 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 ROPN1BQ9BZX4 212 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 SLITRK2Q9H156 845 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 NEUROG2Q9H2A3 272 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 IKZF5Q9H5V7 419 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 DHX33Q9H6R0 707 aaKnown RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 LRRC19Q9H756 370 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 ROPN1Q9HAT0 212 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 MEPEQ9NQ76 525 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 XPNPEP1Q9NQW7 623 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 PARVAQ9NVD7 372 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 ADAM22Q9P0K1 906 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 ABCD2Q9UBJ2 740 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 P2RX2Q9UBL9 471 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 GHRLQ9UBU3 117 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 ZNF490Q9ULM2 529 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 PIN4Q9Y237 131 aaKnown RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 VSIG4Q9Y279 399 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 SNX24Q9Y343 169 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 DHRS7Q9Y394 339 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 IGKV6D-21A0A0A0MT36 114 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 GOLGA6L7A0A1B0GV03 622 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 GSTTP1A0A1W2PQM5 241 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 KRT87PA6NCN2 255 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 RNF222A6NCQ9 220 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 FBLL1A6NHQ2 334 aaKnown RBP3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 H0YHG0 523 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 SLC17A2O00624 439 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 MED7O43513 233 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 SSX5O60225 188 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 TOM1L1O75674 476 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 SLC2A10O95528 541 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 PTBP3O95758 552 aaKnown RBP3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 FAM107AO95990 144 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 IGKV3-15P01624 115 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 TNNC2P02585 160 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 SLC35G4P0C7Q5 338 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 GHRP10912 638 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 DESP17661 470 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 CCNA2P20248 432 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 ARL2P36404 184 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 SSR1P43307 286 aaKnown RBP3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 MARCKSL1P49006 195 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 ACOT2P49753 483 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 STK19P49842 368 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 SLC26A2P50443 739 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 METAP1P53582 386 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 MAGOHP61326 146 aaKnown RBP3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 IL1RL1Q01638 556 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 SRYQ05066 204 aa3.32□□□□□ -1.88
HMGB3P6-201ENST00000444896 VGLL4Q14135 290 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms