RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 RFX3P48380 749 aa14.97□□□□□ -0.01
PIKFYVE-206ENST00000443896 SKP1P63208 163 aa14.97□□□□□ -0.01
PIKFYVE-206ENST00000443896 SRSF5Q13243 272 aaKnown RBP14.97□□□□□ -0.01
PIKFYVE-206ENST00000443896 FZD5Q13467 585 aa14.97□□□□□ -0.01
PIKFYVE-206ENST00000443896 BMP8AQ7Z5Y6 402 aa14.97□□□□□ -0.01
PIKFYVE-206ENST00000443896 C9orf62Q8N4C0 152 aa14.97□□□□□ -0.01
PIKFYVE-206ENST00000443896 ARIH2OSQ8N7S6 290 aa14.97□□□□□ -0.01
PIKFYVE-206ENST00000443896 SYT14Q8NB59 555 aa14.97□□□□□ -0.01
PIKFYVE-206ENST00000443896 OR4N2Q8NGD1 307 aa14.97□□□□□ -0.01
PIKFYVE-206ENST00000443896 OR13C2Q8NGS9 318 aa14.97□□□□□ -0.01
PIKFYVE-206ENST00000443896 ARSGQ96EG1 525 aa14.97□□□□□ -0.01
PIKFYVE-206ENST00000443896 KATNB1Q9BVA0 655 aa14.97□□□□□ -0.01
PIKFYVE-206ENST00000443896 HRO43593 1189 aa14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 CAPZBP47756 277 aa14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 TNK1Q13470 666 aa14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 ZNF791Q3KP31 576 aaPredicted RBP14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 SLC35F1Q5T1Q4 408 aa14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 ZNF322Q6U7Q0 402 aaPredicted RBP14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 THSD4Q6ZMP0 1018 aa14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 MEPCEQ7L2J0 689 aaKnown RBP14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 ARL14Q8N4G2 192 aa14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 SPRYD4Q8WW59 207 aaPredicted RBP14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 UPRTQ96BW1 309 aa14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 TCTN2Q96GX1 697 aa14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 RBM18Q96H35 190 aaKnown RBP14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 PEX11GQ96HA9 241 aa14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 MAP3K3Q99759 626 aa14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 ZNF426Q9BUY5 554 aa14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 CMC2Q9NRP2 79 aa14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 DNAJB12Q9NXW2 375 aaKnown RBP14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 TDRD6O60522 2096 aaKnown RBP14.96□□□□□ -0.01
PIKFYVE-206ENST00000443896 BLACEA4D250 179 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 GTPBP1O00178 669 aaKnown RBP14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 HRKO00198 91 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 ADAM11O75078 769 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 RFPL3O75679 317 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 GAAP10253 952 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 ACAA2P42765 397 aaKnown RBP14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 ARHGDIBP52566 201 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 STX4Q12846 297 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 SMARCD3Q6STE5 483 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 ZNF595Q8IYB9 648 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 FAM181AQ8N9Y4 354 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 OR51G2Q8NGK0 314 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 GRHL3Q8TE85 626 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 COMMD3Q9UBI1 195 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 GMEB2Q9UKD1 530 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 MRPS33Q9Y291 106 aaKnown RBP14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 CLDN16Q9Y5I7 305 aa14.96□□□□□ -0.02
PIKFYVE-206ENST00000443896 IGHV1OR15-9A0A0B4J2B8 117 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 A0A1B0GWA3 101 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 CHURC1-FNTBB4DL54 471 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 PTP4A3O75365 173 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 GPR85P60893 370 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 FOXK2Q01167 660 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 PRPF38BQ5VTL8 546 aaKnown RBP14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 TCTE3Q8IZS6 198 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 RDH10Q8IZV5 341 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 ZNF614Q8N883 585 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 OTULINQ96BN8 352 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 MIXL1Q9H2W2 232 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 UCK1Q9HA47 277 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 IFNA16P05015 189 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 SAGP10523 405 aaPredicted RBP14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 PAICSP22234 425 aaKnown RBP14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 ZNF81P51508 661 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 MAB21L1Q13394 359 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 FAM53BQ14153 422 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 ELOCQ15369 112 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 TDHQ8IZJ6 230 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 TSTD1Q8NFU3 115 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 ADAMTS18Q8TE60 1221 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 KISS1RQ969F8 398 aaPredicted RBP14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 ZNF285Q96NJ3 590 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 MED20Q9H944 212 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 SLC2A4RGQ9NR83 387 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 DTX4Q9Y2E6 619 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 FAM86C2PA6NEL3 165 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 ZNF217O75362 1048 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 NSA2O95478 260 aaKnown RBP14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 CFDP00746 253 aaPredicted RBP14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 WNT1P04628 370 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 CELP19835 753 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 RBM34P42696 430 aaKnown RBP14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 ZNF141Q15928 474 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 TUSC1Q2TAM9 212 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 COL13A1Q5TAT6 717 aaPredicted RBP14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 VASNQ6EMK4 673 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 NPSR1Q6W5P4 371 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 B3GLCTQ6Y288 498 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 C17orf107Q6ZR85 190 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 ACBD7Q8N6N7 88 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 C19orf18Q8NEA5 215 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 OR10Z1Q8NGY1 313 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 SETD6Q8TBK2 473 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 PTCHD1Q96NR3 888 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 IFT27Q9BW83 186 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 HCAR1Q9BXC0 346 aa14.95□□□□□ -0.02
PIKFYVE-206ENST00000443896 TPSD1Q9BZJ3 242 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms