RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SLC35F2Q8IXU6 374 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 OR6V1Q8N148 313 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 RADILQ96JH8 1075 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 ADAD1Q96M93 576 aaKnown RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 C19orf43Q9BQ61 176 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 B3GNT4Q9C0J1 378 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 TSPAN10Q9H1Z9 355 aaPredicted RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 SRA1Q9HD15 236 aaKnown RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 HMX1Q9NP08 348 aaPredicted RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 SLC6A20Q9NP91 592 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 EXOGQ9Y2C4 368 aaKnown RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 V9GY05 133 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 CACNA1IQ9P0X4 2223 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 CENPVL1A0A0U1RR11 272 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 ELOA3DA6NLF2 546 aaPredicted RBP8.37□□□□□ -1.07
COPB1-202ENST00000439561 SYT5O00445 386 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 LDB3O75112 727 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 GLULP15104 373 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 PPP3CBP16298 524 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 ACHEP22303 614 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 SLC7A9P82251 487 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 HLXQ14774 488 aaPredicted RBP8.37□□□□□ -1.07
COPB1-202ENST00000439561 DUSP5Q16690 384 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 ELOA3BQ3SY89 546 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 AMZ1Q400G9 498 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 TMEM255AQ5JRV8 349 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 CST9Q5W186 159 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 OTPQ5XKR4 325 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 FAM111BQ6SJ93 734 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 NDUFAF7Q7L592 441 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 KRT77Q7Z794 578 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 NRROSQ86YC3 692 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 BEST3Q8N1M1 668 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 LRRC25Q8N386 305 aaPredicted RBP8.37□□□□□ -1.07
COPB1-202ENST00000439561 ELOA3Q8NG57 546 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 SCARB1Q8WTV0 552 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 CASTOR1Q8WTX7 329 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 NR4A3Q92570 626 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 PTP4A1Q93096 173 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 SEC22AQ96IW7 307 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 MNTQ99583 582 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 SYNDIG1Q9H7V2 258 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 NRIP3Q9NQ35 241 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 SAGE1Q9NXZ1 904 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 KIF25Q9UIL4 384 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 ADAM18Q9Y3Q7 739 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 PCYT1BQ9Y5K3 369 aaPredicted RBP8.37□□□□□ -1.07
COPB1-202ENST00000439561 TET1Q8NFU7 2136 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 SLC22A23A1A5C7 686 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 CARNS1A5YM72 827 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 OR14I1A6ND48 311 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 OR2AT4A6NND4 320 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 MCRIP1C9JLW8 97 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 F5H0A9 414 aaPredicted RBP8.37□□□□□ -1.07
COPB1-202ENST00000439561 PYCARD-AS1I3L0S3 204 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 SELENOFO60613 162 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 SC5DO75845 299 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 OR8G3PP0DMU2 310 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 ADRB3P13945 408 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 SRMP19623 302 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 CDK2P24941 298 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 REEP5Q00765 189 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 RIN1Q13671 783 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 EXOSC7Q15024 291 aaKnown RBP8.37□□□□□ -1.07
COPB1-202ENST00000439561 RPE65Q16518 533 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 ALG10BQ5I7T1 473 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 BAIAP2L2Q6UXY1 529 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 UBE3DQ7Z6J8 389 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 GATSQ8NAP1 163 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 TTLQ8NG68 377 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 OR4K14Q8NGD5 310 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 OR5K2Q8NHB8 316 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 LCN9Q8WX39 176 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 HGDQ93099 445 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 WDR34Q96EX3 536 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 LMF1Q96S06 567 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 UBL7Q96S82 380 aaPredicted RBP8.37□□□□□ -1.07
COPB1-202ENST00000439561 NMNAT3Q96T66 252 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 MICU1Q9BPX6 476 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 LGR4Q9BXB1 951 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 ZNF768Q9H5H4 540 aaKnown RBP8.37□□□□□ -1.07
COPB1-202ENST00000439561 TREM1Q9NP99 234 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 ASF1BQ9NVP2 202 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 CLDND1Q9NY35 253 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 GPR160Q9UJ42 338 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 SCN2AQ99250 2005 aa8.37□□□□□ -1.07
COPB1-202ENST00000439561 PLPP2O43688 288 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 CLEC3AO75596 197 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 IGF2P01344 180 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 ZNF806P0C7X5 589 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 IFNGR1P15260 489 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 CMPK1P30085 196 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 THBS2P35442 1172 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 PRDX1Q06830 199 aaKnown RBP8.36□□□□□ -1.07
COPB1-202ENST00000439561 ZNF273Q14593 569 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 TCTN1Q2MV58 587 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 TCEAL5Q5H9L2 206 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 LRFN4Q6PJG9 635 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 ZNF546Q86UE3 836 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 OR7G2Q8NG99 324 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms