RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 PDCD4Q53EL6 469 aaKnown RBP16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 COX20Q5RI15 118 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 MRPL2Q5T653 305 aaKnown RBP16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 ATG4DQ86TL0 474 aaPredicted RBP16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 ZNF440Q8IYI8 595 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 ZNF433Q8N7K0 673 aaPredicted RBP16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 LILRB1Q8NHL6 650 aaPredicted RBP16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 NEUROG1Q92886 237 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 RMND5AQ9H871 391 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 MANSC1Q9H8J5 431 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 FAIMQ9NVQ4 179 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 ASB6Q9NWX5 421 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 CALML5Q9NZT1 146 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 TRAPPC4Q9Y296 219 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 PRR14LQ5THK1 2151 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 TMEM247A6NEH6 219 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 DPRXA6NFQ7 191 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 OR5H1A6NKK0 313 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 ADAM11O75078 769 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 ERLIN1O75477 346 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 SOD3P08294 240 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 SLC1A3P43003 542 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 CRATP43155 626 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 MAP2K6P52564 334 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 CDH11P55287 796 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 PPP2R2BQ00005 443 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 VEZF1Q14119 521 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 ETFDHQ16134 617 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 GSTA3Q16772 222 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 CASP12Q6UXS9 341 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 CCDC103Q8IW40 242 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 TAS2R16Q9NYV7 291 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 OSGIN1Q9UJX0 560 aa16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 MAGED1Q9Y5V3 778 aaPredicted RBP16.29■□□□□ 0.2
AC004540.1-201ENST00000439120 TMEM72A0PK05 275 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 FAAHO00519 579 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 ABCD4O14678 606 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 ZNF208O43345 1280 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 DANCRP0C864 163 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 RPS4Y1P22090 263 aaKnown RBP16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 CXCR1P25024 350 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 PCSK6P29122 969 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 IDUAP35475 653 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 CDKN1AP38936 164 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 SLC16A1P53985 500 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 CRISP3P54108 245 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 SLC18A1P54219 525 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 PLAURQ03405 335 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 CLEC12BQ2HXU8 276 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 LIN52Q52LA3 116 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 KLHL17Q6TDP4 642 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 SEZ6L2Q6UXD5 910 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 TMEM108Q6UXF1 575 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 OR52N5Q8NH56 324 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 ITCHQ96J02 903 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 TRIM2Q9C040 744 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 PARPBPQ9NWS1 579 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 CISD1Q9NZ45 108 aaKnown RBP16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 ZIM2Q9NZV7 527 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 UPB1Q9UBR1 384 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 POU2F3Q9UKI9 436 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 SLC9A8Q9Y2E8 581 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 NAV3Q8IVL0 2385 aa16.28■□□□□ 0.2
AC004540.1-201ENST00000439120 UBDO15205 165 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 RAMP1O60894 148 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 PGM3O95394 542 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 BCHEP06276 602 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 ETFAP13804 333 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 DSTNP60981 165 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 COPZ1P61923 177 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 EPS8Q12929 822 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 SLC9B1Q4ZJI4 515 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 C6orf10Q5SRN2 563 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 OR7E24Q6IFN5 339 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 OR52P1PQ8NH57 321 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 RADILQ96JH8 1075 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 ARMC7Q9H6L4 198 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 THUMPD1Q9NXG2 353 aaKnown RBP16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 MALT1Q9UDY8 824 aa16.27■□□□□ 0.2
AC004540.1-201ENST00000439120 USF3Q68DE3 2245 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 OVOL3O00110 214 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 GPIP06744 558 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 ZCCHC18P0CG32 403 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 NCF2P19878 526 aaPredicted RBP16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 ZNF83P51522 516 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 POLR2JP52435 117 aaKnown RBP16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 TNK1Q13470 666 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 LARS2Q15031 903 aaKnown RBP16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 MSANTD1Q6ZTZ1 278 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 VRK2Q86Y07 508 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 DEPDC4Q8N2C3 294 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 MIER2Q8N344 545 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 CADM2Q8N3J6 435 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 MAELQ96JY0 434 aaKnown RBP16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 HS6ST2Q96MM7 605 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 TPT1P8Q9HAU6 139 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 SDR39U1Q9NRG7 319 aaPredicted RBP16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 SLC6A13Q9NSD5 602 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 RLIMQ9NVW2 624 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms