RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 OR2M5A3KFT3 312 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 LEFTY2O00292 366 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 PEX12O00623 359 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 PIN1P1O15428 100 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 HIST1H2ABP04908 130 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 PTH2RP49190 550 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 P2RX1P51575 399 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 LUMP51884 338 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-204ENST00000438964 CBFBQ13951 182 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 RBMS2Q15434 407 aaKnown RBP12.35□□□□□ -0.43
ACTN1-204ENST00000438964 PCGF3Q3KNV8 242 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 FAM46CQ5VWP2 391 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 OR4C11Q6IEV9 310 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 HIST3H2AQ7L7L0 130 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 HIST1H2ACQ93077 130 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 SLC35A4Q96G79 324 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 AIF1LQ9BQI0 150 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 HCFC1R1Q9NWW0 138 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 KLHL9Q9P2J3 617 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 COL4A3Q01955 1670 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 TMEM272A0A1B0GTI8 110 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 TMEM200CA6NKL6 621 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 H7C2Y5 167 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 MAS1P04201 325 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 HMGN1P05114 100 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 GIPP09681 153 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-204ENST00000438964 PRKAR2AP13861 404 aaKnown RBP12.35□□□□□ -0.43
ACTN1-204ENST00000438964 IFNGR1P15260 489 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 PPP3CBP16298 524 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 MAT1AQ00266 395 aaKnown RBP12.35□□□□□ -0.43
ACTN1-204ENST00000438964 CAP1Q01518 475 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 MESP2Q0VG99 397 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 PRRT3Q5FWE3 981 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 B3GNTL1Q67FW5 361 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-204ENST00000438964 TMEFF1Q8IYR6 380 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 OR52E2Q8NGJ4 325 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 ELP4Q96EB1 424 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 PTDSS2Q9BVG9 487 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 SLC6A15Q9H2J7 730 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 IL21Q9HBE4 155 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 HMX1Q9NP08 348 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-204ENST00000438964 MRPL17Q9NRX2 175 aaKnown RBP12.35□□□□□ -0.43
ACTN1-204ENST00000438964 KLHL28Q9NXS3 571 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 MED11Q9P086 117 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 FBXO4Q9UKT5 387 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 FBXL3Q9UKT7 428 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 PLCL2Q9UPR0 1127 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 PPIL1Q9Y3C6 166 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 ADAM18Q9Y3Q7 739 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 RD3LP0DJH9 198 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 HTR2AP28223 471 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 RAP2BP61225 183 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 DMKNQ6E0U4 476 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-204ENST00000438964 MAMSTRQ6ZN01 415 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 PARS2Q7L3T8 475 aaKnown RBP12.34□□□□□ -0.43
ACTN1-204ENST00000438964 CDH26Q8IXH8 852 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 FAM98AQ8NCA5 519 aaKnown RBP12.34□□□□□ -0.43
ACTN1-204ENST00000438964 PXT1Q8NFP0 134 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 BRIX1Q8TDN6 353 aaKnown RBP12.34□□□□□ -0.43
ACTN1-204ENST00000438964 ADAMTS15Q8TE58 950 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 CPNE2Q96FN4 548 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-204ENST00000438964 TNFRSF13CQ96RJ3 184 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 UQCC2Q9BRT2 126 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 CLDND1Q9NY35 253 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 TRAV20A0A0B4J274 112 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 LINC00587B1AMM8 73 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 DISC1C4P0D8 188 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 BHLHE40O14503 412 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 TO15178 435 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 AIFM1O95831 613 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 NT5EP21589 574 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 STARP49675 285 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 RPS11P62280 158 aaKnown RBP eCLIP12.34□□□□□ -0.43
ACTN1-204ENST00000438964 UBE2IP63279 158 aaKnown RBP12.34□□□□□ -0.43
ACTN1-204ENST00000438964 PUS10Q3MIT2 529 aaKnown RBP12.34□□□□□ -0.43
ACTN1-204ENST00000438964 ZNF626Q68DY1 528 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 ZCCHC12Q6PEW1 402 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 FIGNL1Q6PIW4 674 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 ZNF836Q6ZNA1 936 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 USP50Q70EL3 339 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-204ENST00000438964 SLC16A13Q7RTY0 426 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 TPRA1Q86W33 373 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 LINC00471Q8N535 108 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 OR51S1Q8NGJ8 323 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 OR5M9Q8NGP3 310 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 C3orf49Q96BT1 292 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 WDR34Q96EX3 536 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 PTCHD1Q96NR3 888 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 TSNAXQ99598 290 aaKnown RBP12.34□□□□□ -0.43
ACTN1-204ENST00000438964 IFT22Q9H7X7 185 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 ZMAT3Q9HA38 289 aaKnown RBP12.34□□□□□ -0.43
ACTN1-204ENST00000438964 ST6GALNAC2Q9UJ37 374 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 SLC45A1Q9Y2W3 748 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 HCFC2Q9Y5Z7 792 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 RNF215Q9Y6U7 377 aa12.34□□□□□ -0.43
ACTN1-204ENST00000438964 ASCC3Q8N3C0 2202 aaKnown RBP12.33□□□□□ -0.43
ACTN1-204ENST00000438964 A0A0G2JPF8 293 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 HNRNPCL3B7ZW38 293 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 F5H5P2 479 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 STX11O75558 287 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms