RNA–Protein interactions for RNA: ENST00000437679.3

LIMS3-201, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LIMS3, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-201ENST00000437679 SERPINB7O75635 380 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 PRG2P13727 222 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 PPP3CBP16298 524 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 KLK2P20151 261 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 MTPNP58546 118 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 SLC35A1P78382 337 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 POU4F3Q15319 338 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 MAPRE2Q15555 327 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 ADRM1Q16186 407 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 MMEL1Q495T6 779 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 ANKRD34AQ69YU3 496 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 ABLIM2Q6H8Q1 611 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 DHRS4L2Q6PKH6 230 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 TFAP2EQ6VUC0 442 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 GALNT5Q7Z7M9 940 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 C11orf65Q8NCR3 313 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 BHLHE22Q8NFJ8 381 aaPredicted RBP13.51□□□□□ -0.25
LIMS3-201ENST00000437679 PIGXQ8TBF5 258 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 NAA11Q9BSU3 229 aaPredicted RBP13.51□□□□□ -0.25
LIMS3-201ENST00000437679 POTEKPQ9BYX7 375 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 SAR1AQ9NR31 198 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 EMC3Q9P0I2 261 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 KLHL14Q9P2G3 628 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 SLC13A4Q9UKG4 626 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 GPR52Q9Y2T5 361 aa13.51□□□□□ -0.25
LIMS3-201ENST00000437679 FRS3O43559 492 aa13.5□□□□□ -0.25
LIMS3-201ENST00000437679 EIF1BO60739 113 aaKnown RBP13.5□□□□□ -0.25
LIMS3-201ENST00000437679 HRGP04196 525 aa13.5□□□□□ -0.25
LIMS3-201ENST00000437679 CRYGSP22914 178 aa13.5□□□□□ -0.25
LIMS3-201ENST00000437679 AQP1P29972 269 aa13.5□□□□□ -0.25
LIMS3-201ENST00000437679 DNAJA1P31689 397 aaKnown RBP13.5□□□□□ -0.25
LIMS3-201ENST00000437679 IDUAP35475 653 aa13.5□□□□□ -0.25
LIMS3-201ENST00000437679 RBBP4Q09028 425 aa13.5□□□□□ -0.25
LIMS3-201ENST00000437679 KLF10Q13118 480 aa13.5□□□□□ -0.25
LIMS3-201ENST00000437679 CYLC2Q14093 348 aaPredicted RBP13.5□□□□□ -0.25
LIMS3-201ENST00000437679 PDK3Q15120 406 aa13.5□□□□□ -0.25
LIMS3-201ENST00000437679 TRMT5Q32P41 509 aaKnown RBP13.5□□□□□ -0.25
LIMS3-201ENST00000437679 STAC2Q6ZMT1 411 aa13.5□□□□□ -0.25
LIMS3-201ENST00000437679 NRGNQ92686 78 aa13.5□□□□□ -0.25
LIMS3-201ENST00000437679 ZNF775Q96BV0 537 aaPredicted RBP13.5□□□□□ -0.25
LIMS3-201ENST00000437679 ZC3HAV1LQ96H79 300 aaKnown RBP13.5□□□□□ -0.25
LIMS3-201ENST00000437679 ZNF300Q96RE9 604 aaPredicted RBP13.5□□□□□ -0.25
LIMS3-201ENST00000437679 HDHD5Q9BXW7 423 aa13.5□□□□□ -0.25
LIMS3-201ENST00000437679 RPS6KB2Q9UBS0 482 aa13.5□□□□□ -0.25
LIMS3-201ENST00000437679 ING1Q9UK53 422 aaPredicted RBP13.5□□□□□ -0.25
LIMS3-201ENST00000437679 IGKV3D-15A0A087WSY6 115 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 ZC3H12DA2A288 527 aaKnown RBP13.49□□□□□ -0.25
LIMS3-201ENST00000437679 BBIP1A8MTZ0 92 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 A8MVM7 634 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 FBP2O00757 339 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 GPR171O14626 319 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 IMPDH2P12268 514 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 PSMB1P20618 241 aaKnown RBP13.49□□□□□ -0.25
LIMS3-201ENST00000437679 FPR1P21462 350 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 ADSLP30566 484 aaPredicted RBP13.49□□□□□ -0.25
LIMS3-201ENST00000437679 OR3A2P47893 321 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 NCALDP61601 193 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 HOXC5Q00444 222 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 SELPLGQ14242 412 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 CAPRIN1Q14444 709 aaKnown RBP13.49□□□□□ -0.25
LIMS3-201ENST00000437679 COQ5Q5HYK3 327 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 CXorf67Q86X51 503 aaPredicted RBP13.49□□□□□ -0.25
LIMS3-201ENST00000437679 ARMC8Q8IUR7 673 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 LURAP1LQ8IV03 231 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 SLC30A8Q8IWU4 369 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 ZNF100Q8IYN0 542 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 GABRG1Q8N1C3 465 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 STEAP2Q8NFT2 490 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 C3orf49Q96BT1 292 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 SH3GL1Q99961 368 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 TAPBPLQ9BX59 468 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 ACTR6Q9GZN1 396 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 OR10A4Q9H209 315 aa13.49□□□□□ -0.25
LIMS3-201ENST00000437679 KAT8Q9H7Z6 458 aaKnown RBP13.49□□□□□ -0.25
LIMS3-201ENST00000437679 C6orf203Q9P0P8 240 aaPredicted RBP13.49□□□□□ -0.25
LIMS3-201ENST00000437679 NOSIPQ9Y314 301 aaKnown RBP13.49□□□□□ -0.25
LIMS3-201ENST00000437679 MRASO14807 208 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 ADAP00813 363 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 NPPAP01160 153 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 GPIP06744 558 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 IL32P24001 234 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 SLC16A1P53985 500 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 H3F3AP84243 136 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 BNIP2Q12982 314 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 CEACAM7Q14002 265 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 P2RY6Q15077 328 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 OR7A5Q15622 319 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 REP15Q6BDI9 236 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 PAQR6Q6TCH4 344 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 NET1Q7Z628 596 aaPredicted RBP13.48□□□□□ -0.25
LIMS3-201ENST00000437679 ATG4DQ86TL0 474 aaPredicted RBP13.48□□□□□ -0.25
LIMS3-201ENST00000437679 SNX32Q86XE0 403 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 PTOV1Q86YD1 416 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 CCDC103Q8IW40 242 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 OR52E4Q8NGH9 312 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 OR10A6Q8NH74 314 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 NINJ1Q92982 152 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 LRRC58Q96CX6 371 aa13.48□□□□□ -0.25
LIMS3-201ENST00000437679 ZNF317Q96PQ6 595 aaPredicted RBP13.48□□□□□ -0.25
LIMS3-201ENST00000437679 TRIM2Q9C040 744 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms