RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 ADIPOQQ15848 244 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 ZNF141Q15928 474 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 MAPK14Q16539 360 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 ZSWIM7Q19AV6 140 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 TUBA1AQ71U36 451 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 EIF3MQ7L2H7 374 aaKnown RBP12.88□□□□□ -0.35
HDAC8-213ENST00000436675 ACMSDQ8TDX5 336 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 SLC38A2Q96QD8 506 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 NMUR2Q9GZQ4 415 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 RAB1BQ9H0U4 201 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 SERHL2Q9H4I8 314 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 PARPBPQ9NWS1 579 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 SLC9A8Q9Y2E8 581 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 HDGFL3Q9Y3E1 203 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 SH3PXD2BA1X283 911 aa12.87□□□□□ -0.35
HDAC8-213ENST00000436675 TMEM233B4DJY2 109 aa12.87□□□□□ -0.35
HDAC8-213ENST00000436675 DDX5P17844 614 aaKnown RBP12.87□□□□□ -0.35
HDAC8-213ENST00000436675 MATN1P21941 496 aa12.87□□□□□ -0.35
HDAC8-213ENST00000436675 ECHS1P30084 290 aa12.87□□□□□ -0.35
HDAC8-213ENST00000436675 DNAJB13P59910 316 aa12.87□□□□□ -0.35
HDAC8-213ENST00000436675 CKAP4Q07065 602 aaKnown RBP12.87□□□□□ -0.35
HDAC8-213ENST00000436675 LSM12Q3MHD2 195 aaKnown RBP12.87□□□□□ -0.35
HDAC8-213ENST00000436675 THSD4Q6ZMP0 1018 aa12.87□□□□□ -0.35
HDAC8-213ENST00000436675 ADGRG3Q86Y34 549 aa12.87□□□□□ -0.35
HDAC8-213ENST00000436675 KRTCAP2Q8N6L1 136 aa12.87□□□□□ -0.35
HDAC8-213ENST00000436675 SEMA6DQ8NFY4 1073 aa12.87□□□□□ -0.35
HDAC8-213ENST00000436675 SFXN5Q8TD22 340 aa12.87□□□□□ -0.35
HDAC8-213ENST00000436675 GCDHQ92947 438 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-213ENST00000436675 PLK3Q9H4B4 646 aa12.87□□□□□ -0.35
HDAC8-213ENST00000436675 SEC61A2Q9H9S3 476 aa12.87□□□□□ -0.35
HDAC8-213ENST00000436675 TMEM181Q9P2C4 612 aa12.87□□□□□ -0.35
HDAC8-213ENST00000436675 TMED5Q9Y3A6 229 aa12.87□□□□□ -0.35
HDAC8-213ENST00000436675 hCG_2039718K7EN88 272 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 NR5A2O00482 541 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 ANKRD28O15084 1053 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 GLRA3O75311 464 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 STX11O75558 287 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 LGI1O95970 557 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 CHEK2O96017 543 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 CRYAAP02489 173 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 TACSTD2P09758 323 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 IMPDH2P12268 514 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 IFNGR1P15260 489 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 GIFP27352 417 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 PGM1P36871 562 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 PPOXP50336 477 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 NAA20P61599 178 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 LGALS3BPQ08380 585 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 PTGR1Q14914 329 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 AAED1Q7RTV5 226 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 C16orf62Q7Z3J2 963 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 GRINAQ7Z429 371 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 SVOPLQ8N434 492 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 PSMA8Q8TAA3 256 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 HPS1Q92902 700 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 AURKBQ96GD4 344 aaPredicted RBP12.86□□□□□ -0.35
HDAC8-213ENST00000436675 NAA11Q9BSU3 229 aaPredicted RBP12.86□□□□□ -0.35
HDAC8-213ENST00000436675 C1orf50Q9BV19 199 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 NARFLQ9H6Q4 476 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 GRPEL1Q9HAV7 217 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 LPAR2Q9HBW0 351 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 OXSMQ9NWU1 459 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 DNAJC15Q9Y5T4 150 aa12.86□□□□□ -0.35
HDAC8-213ENST00000436675 TMED7-TICAM2A0A0A6YYA0 188 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 TMEM72A0PK05 275 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 CLDN24A6NM45 220 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 TMEM114B3SHH9 223 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 DNPH1O43598 174 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 PLIN3O60664 434 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 PEX11AO75192 247 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 KRT33AO76009 404 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 CPA3P15088 417 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 CALCRP30988 508 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 RPL3P39023 403 aaKnown RBP12.85□□□□□ -0.35
HDAC8-213ENST00000436675 SLC1A3P43003 542 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 IDH2P48735 452 aaKnown RBP12.85□□□□□ -0.35
HDAC8-213ENST00000436675 DVL1P1P54792 670 aaPredicted RBP12.85□□□□□ -0.35
HDAC8-213ENST00000436675 ETF1P62495 437 aaKnown RBP12.85□□□□□ -0.35
HDAC8-213ENST00000436675 HBA1P69905 142 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 SLC35A1P78382 337 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 H3F3AP84243 136 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 SLC17A1Q14916 467 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 ARHGAP11BQ3KRB8 267 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 TBRG1Q3YBR2 411 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 KANK2Q63ZY3 851 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 C6orf120Q7Z4R8 191 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 NOA1Q8NC60 698 aaKnown RBP12.85□□□□□ -0.35
HDAC8-213ENST00000436675 SGMS2Q8NHU3 365 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 MZB1Q8WU39 189 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 MOAP1Q96BY2 351 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 ZMYND19Q96E35 227 aaPredicted RBP12.85□□□□□ -0.35
HDAC8-213ENST00000436675 SLC35G5Q96KT7 338 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 ZNF385AQ96PM9 386 aaKnown RBP12.85□□□□□ -0.35
HDAC8-213ENST00000436675 KATNB1Q9BVA0 655 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 PSMC3IPQ9P2W1 217 aaPredicted RBP12.85□□□□□ -0.35
HDAC8-213ENST00000436675 TMED7Q9Y3B3 224 aa12.85□□□□□ -0.35
HDAC8-213ENST00000436675 A0A096LPE4 126 aa12.84□□□□□ -0.35
HDAC8-213ENST00000436675 A0A1W2PPZ6 126 aa12.84□□□□□ -0.35
HDAC8-213ENST00000436675 ZC3H12DA2A288 527 aaKnown RBP12.84□□□□□ -0.35
HDAC8-213ENST00000436675 AP3D1O14617 1153 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms