RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PDCD1LG2Q9BQ51 273 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 OR51M1Q9H341 326 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF275Q9NSD4 429 aaPredicted RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 FBXL4Q9UKA2 621 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ACOD1A6NK06 481 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 GLOD5A6NK44 160 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 TBL1XO60907 577 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 SNAPINO95295 136 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 STATHP02808 62 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ANXA2P07355 339 aaKnown RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 SMIM6P0DI80 62 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 CALCRP30988 508 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 NTSP30990 170 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 PSEN2P49810 448 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 DHODHQ02127 395 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ZNHIT3Q15649 155 aaPredicted RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF124Q15973 351 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 TMEM69Q5SWH9 247 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 FAM122BQ7Z309 247 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 DVL3Q92997 716 aaPredicted RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 OTUB2Q96DC9 234 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 IL21RQ9HBE5 538 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ZDHHC3Q9NYG2 299 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 RALGAPA2Q2PPJ7 1873 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 PRAMEF27A3QJZ7 478 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 NPIPB15A6NHN6 443 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 C1orf196B1AJZ1 125 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 MT-ND5P03915 603 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF10P21506 573 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 TDGQ13569 410 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 PEA15Q15121 130 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF697Q5TEC3 545 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 FAM220AQ7Z4H9 259 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 OR10R2Q8NGX6 335 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 BRIX1Q8TDN6 353 aaKnown RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 JSRP1Q96MG2 331 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 MICU1Q9BPX6 476 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 TMPRSS13Q9BYE2 586 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 MRPS30Q9NP92 439 aaKnown RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 GNG13Q9P2W3 67 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 TIMM8BQ9Y5J9 83 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 TRPV2Q9Y5S1 764 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 HMSDA8MTL9 139 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 SYT5O00445 386 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 HMGN4O00479 90 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 SURF4O15260 269 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 ST8SIA5O15466 376 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 KLKB1P03952 638 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 H2AFB1P0C5Y9 115 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 GSTM3P21266 225 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 MPGP29372 298 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 PSMB10P40306 273 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 RING1Q06587 406 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 GRHL2Q6ISB3 625 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 SERINC5Q86VE9 423 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 DCUN1D3Q8IWE4 304 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 APCDD1Q8J025 514 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 BEST3Q8N1M1 668 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 WDSUB1Q8N9V3 476 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 DNAAF1Q8NEP3 725 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 OR6K3Q8NGY3 331 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 FN3KQ9H479 309 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 DZANK1Q9NVP4 752 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 RBM7Q9Y580 266 aaKnown RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 GREB1Q4ZG55 1949 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 CDHR4A6H8M9 788 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 ACTL6AO96019 429 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 CD63P08962 238 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF14P17017 642 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 CCND3P30281 292 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 HTR1FP30939 366 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 CDH4P55283 916 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 SEC13P55735 322 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 HABP2Q14520 560 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 OR2B11Q5JQS5 317 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 CAMKVQ8NCB2 501 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 TRIM2Q9C040 744 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 ZCCHC3Q9NUD5 404 aaKnown RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 LHX3Q9UBR4 397 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 OR2AT4A6NND4 320 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 AP3S2P59780 193 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 ALKBH1Q13686 389 aaKnown RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 LASP1Q14847 261 aaKnown RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 PGGHGQ32M88 737 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 SLC25A30Q5SVS4 291 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 PLPP4Q5VZY2 271 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 CD300LGQ6UXG3 332 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 NRSN1Q8IZ57 195 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 GOT1L1Q8NHS2 421 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 PTPRDP23468 1912 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 DEFA6Q01524 100 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 SKP2Q13309 424 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 KLHL26Q53HC5 615 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 ENTPD8Q5MY95 495 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 ARL14Q8N4G2 192 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 SLC44A3Q8N4M1 653 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 ELP5Q8TE02 316 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 ACOT11Q8WXI4 607 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 WBP2Q969T9 261 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 LCORQ96JN0 433 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms