RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 KRCC1Q9NPI7 259 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 PLXNB3Q9ULL4 1909 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 SC5DO75845 299 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 TYRP14679 529 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 FXYD6P3P58550 94 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 UBE2IP63279 158 aaKnown RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 ASTLQ6HA08 431 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 SLC8B1Q6J4K2 584 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 TMED4Q7Z7H5 227 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 TMEM25Q86YD3 366 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 KLHDC8AQ8IYD2 350 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 DNAAF1Q8NEP3 725 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 DUSP19Q8WTR2 217 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 TCEAL4Q96EI5 215 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 PBX4Q9BYU1 374 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 NRIP3Q9NQ35 241 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 STARD7Q9NQZ5 370 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 SCN8AQ9UQD0 1980 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 HMSDA8MTL9 139 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 GRM6O15303 877 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 RPP14O95059 124 aaKnown RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 NDUFB6O95139 128 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 APOC1P02654 83 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 ZNF806P0C7X5 589 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 GPR1P46091 355 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 MEOX2P50222 304 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 AKIRIN2Q53H80 203 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 CST9Q5W186 159 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 Q6ZNB5 142 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 IFNL1Q8IU54 200 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 CDK20Q8IZL9 346 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 OR4D10Q8NGI6 311 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 GRHL3Q8TE85 626 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 DVL3Q92997 716 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 SLC25A38Q96DW6 304 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 CNRIP1Q96F85 164 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 PELI1Q96FA3 418 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 ZNF75AQ96N20 296 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 ARHGDIGQ99819 225 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 CHST6Q9GZX3 395 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 C6orf106Q9H6K1 298 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 CAPN10Q9HC96 672 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 ZNF230Q9UIE0 474 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 LHX6Q9UPM6 363 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 HS3ST2Q9Y278 367 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 ATG4BQ9Y4P1 393 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 NPIPA5A0A0B4J1W7 369 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 TRAV1-2A0A0B4J238 106 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 IFITM5A6NNB3 132 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 NPIPA7E9PJI5 369 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 GNB5O14775 395 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 CTDSPLO15194 276 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 ERI3O43414 337 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 NPIPA8P0DM63 369 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 CTSAP10619 480 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 CBR1P16152 277 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 SIRPAP78324 504 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 PRR5P85299 388 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 SLC9A5Q14940 896 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 GUCA2BQ16661 112 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 UBE3DQ7Z6J8 389 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 SLC16A11Q8NCK7 471 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 OR4K13Q8NH42 304 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 SETD7Q8WTS6 366 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 TFGQ92734 400 aaPredicted RBP10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 SLC22A11Q9NSA0 550 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 MYOFQ9NZM1 2061 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 ANKRD20A5PA0PJZ0 165 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 ITGA10O75578 1167 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 RPLP2P05387 115 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 TAF13Q15543 124 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 ODF4Q2M2E3 257 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 ZNF793Q6ZN11 406 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 PM20D2Q8IYS1 436 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 PUSL1Q8N0Z8 303 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 ZNF614Q8N883 585 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 SDR9C7Q8NEX9 313 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 ZDHHC5Q9C0B5 715 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 FN3KQ9H479 309 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 EXO5Q9H790 373 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 POLMQ9NP87 494 aaPredicted RBP10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 ASF1BQ9NVP2 202 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 ST6GALNAC2Q9UJ37 374 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 CENPVL1A0A0U1RR11 272 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 FAM171A2A8MVW0 826 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 SNRPGP15A8MWD9 76 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 LINC00587B1AMM8 73 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 BHLHE40O14503 412 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 RBBP9O75884 186 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 ITPKBP27987 946 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 ACADLP28330 430 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 FRKP42685 505 aaPredicted RBP10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 EPHB3P54753 998 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 FAM209BQ5JX69 171 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 ELFN2Q5R3F8 820 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 WDR88Q6ZMY6 472 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 FRRS1Q6ZNA5 592 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 RAB11FIP2Q7L804 512 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 OR52E2Q8NGJ4 325 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 CDS1Q92903 461 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms