RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 H7C4K7 107 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 M0R233 179 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 HMGN4O00479 90 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 ABCD4O14678 606 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 PI15O43692 258 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 IGSF6O95976 241 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 CFDP00746 253 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-202ENST00000432306 CATP04040 527 aaKnown RBP7.45□□□□□ -1.22
VTI1A-202ENST00000432306 BCHEP06276 602 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 FGF2P09038 288 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 NPPBP16860 134 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 HTR1FP30939 366 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 IFNGR2P38484 337 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 SLC6A11P48066 632 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 SPINT3P49223 89 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 MANFP55145 182 aaKnown RBP7.45□□□□□ -1.22
VTI1A-202ENST00000432306 PCBP4P57723 403 aaKnown RBP7.45□□□□□ -1.22
VTI1A-202ENST00000432306 ZP1P60852 638 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 RPS16P62249 146 aaKnown RBP7.45□□□□□ -1.22
VTI1A-202ENST00000432306 PITPNAQ00169 270 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 PMP22Q01453 160 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 CSTF1Q05048 431 aaKnown RBP7.45□□□□□ -1.22
VTI1A-202ENST00000432306 NAE1Q13564 534 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 ZNF658BQ4V348 819 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-202ENST00000432306 CLLU1OSQ5K130 101 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 SFRP5Q5T4F7 317 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 PLPP4Q5VZY2 271 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 ZC3H14Q6PJT7 736 aaKnown RBP7.45□□□□□ -1.22
VTI1A-202ENST00000432306 SMARCD3Q6STE5 483 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 ZNF322Q6U7Q0 402 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-202ENST00000432306 RNF44Q7L0R7 432 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 TSPAN33Q86UF1 283 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 EID2Q8N6I1 236 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 IQCF1Q8N6M8 205 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 DTWD2Q8NBA8 298 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 OR2AP1Q8NGE2 309 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 CDC26Q8NHZ8 85 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 TEX47Q8TBZ9 253 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 GNPDA2Q8TDQ7 276 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 UBE2E3Q969T4 207 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 CIDECQ96AQ7 238 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-202ENST00000432306 CAMK1GQ96NX5 476 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 GPA33Q99795 319 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 DPCDQ9BVM2 203 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-202ENST00000432306 FAIM2Q9BWQ8 316 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 HDHD2Q9H0R4 259 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 SLC25A18Q9H1K4 315 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 CCDC86Q9H6F5 360 aaKnown RBP7.45□□□□□ -1.22
VTI1A-202ENST00000432306 PLEKHA1Q9HB21 404 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 G6PC2Q9NQR9 355 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 SDHAF3Q9NRP4 125 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 INPP5EQ9NRR6 644 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 ACSS1Q9NUB1 689 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-202ENST00000432306 TAAR2Q9P1P5 351 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 ATPIF1Q9UII2 106 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 ZNF222Q9UK12 451 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 ING1Q9UK53 422 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-202ENST00000432306 NAP1L6A6NFF2 107 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 SURF4O15260 269 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 RNF13O43567 381 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 PLPP2O43688 288 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 OR2A4O95047 310 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 EIF4EP06730 217 aaKnown RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 GSTP1P09211 210 aaKnown RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 H2AFB1P0C5Y9 115 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 H2AFB2P0C5Z0 115 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 C1GALT1C1LP0DN25 315 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 SAGP10523 405 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 CELP19835 753 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 SDHBP21912 280 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 LCN1P31025 176 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 CSKP41240 450 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 TPMTP51580 245 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 CDH11P55287 796 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 TAS2R50P59544 299 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 ELAVL2Q12926 359 aaKnown RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 KLF9Q13886 244 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 COTL1Q14019 142 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 ST3GAL2Q16842 350 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 EXOSC6Q5RKV6 272 aaKnown RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 ADNP2Q6IQ32 1131 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 SFXN4Q6P4A7 337 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 WASH2PQ6VEQ5 465 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 SLC24A5Q71RS6 500 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 RHOUQ7L0Q8 258 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 PM20D2Q8IYS1 436 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 LINC00518Q8N0U6 118 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 CPXM2Q8N436 756 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 OR5T2Q8NGG2 359 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 OR8D4Q8NGM9 314 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 RPLP0P6Q8NHW5 317 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 BBS10Q8TAM1 723 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 GPBAR1Q8TDU6 330 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 CXorf40AQ8TE69 158 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 NEIL2Q969S2 332 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 LRRC46Q96FV0 321 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 COQ10AQ96MF6 247 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 OR2A7Q96R45 310 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 CACNG6Q9BXT2 260 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 GPR62Q9BZJ7 368 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms