RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 SLC6A6P31641 620 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 NRG3P56975 720 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 RPS7P62081 194 aaKnown RBP15.2■□□□□ 0.02
USHBP1-203ENST00000431146 ITGADQ13349 1161 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 TRA2AQ13595 282 aaKnown RBP eCLIP15.2■□□□□ 0.02
USHBP1-203ENST00000431146 C1DQ13901 141 aaKnown RBP15.2■□□□□ 0.02
USHBP1-203ENST00000431146 C17orf47Q8NEP4 570 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 OIT3Q8WWZ8 545 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 MR1Q95460 341 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 IER3IP1Q9Y5U9 82 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 RIIAD1A6NNX1 92 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 GPX5O75715 221 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 OR7A10O76100 309 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 NDUFB2O95178 105 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 PNMTP11086 282 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 RPL4P36578 427 aaKnown RBP15.2■□□□□ 0.02
USHBP1-203ENST00000431146 SLC1A3P43003 542 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 WNT4P56705 351 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 C19orf48Q6RUI8 117 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 MEPCEQ7L2J0 689 aaKnown RBP15.2■□□□□ 0.02
USHBP1-203ENST00000431146 ADCK1Q86TW2 530 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 COL27A1Q8IZC6 1860 aaPredicted RBP15.2■□□□□ 0.02
USHBP1-203ENST00000431146 SDR9C7Q8NEX9 313 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 OR4K13Q8NH42 304 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 DUSP19Q8WTR2 217 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 TM9SF4Q92544 642 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 KTI12Q96EK9 354 aaPredicted RBP15.2■□□□□ 0.02
USHBP1-203ENST00000431146 VMP1Q96GC9 406 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 SECISBP2Q96T21 854 aaKnown RBP15.2■□□□□ 0.02
USHBP1-203ENST00000431146 TBX5Q99593 518 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 SLC26A1Q9H2B4 701 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 A0A1W2PQD3 144 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 BLOC1S5-TXNDC5H3BN57 136 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 MRPL3P09001 348 aaKnown RBP15.19■□□□□ 0.02
USHBP1-203ENST00000431146 INHBBP09529 407 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 PEPDP12955 493 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 HIST1H1CP16403 213 aaKnown RBP15.19■□□□□ 0.02
USHBP1-203ENST00000431146 ACP1P24666 158 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 BMXP51813 675 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 MC2RQ01718 297 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 DCTN2Q13561 401 aaKnown RBP15.19■□□□□ 0.02
USHBP1-203ENST00000431146 DGUOKQ16854 277 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 ZNF791Q3KP31 576 aaPredicted RBP15.19■□□□□ 0.02
USHBP1-203ENST00000431146 GID4Q8IVV7 300 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 ZFP41Q8N8Y5 198 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 OR52E2Q8NGJ4 325 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 OR9Q1Q8NGQ5 310 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 MOSPD2Q8NHP6 518 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 SMAP2Q8WU79 429 aaPredicted RBP15.19■□□□□ 0.02
USHBP1-203ENST00000431146 FN3KQ9H479 309 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 RERGLQ9H628 205 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 EXOSC4Q9NPD3 245 aaKnown RBP15.19■□□□□ 0.02
USHBP1-203ENST00000431146 KLHL1Q9NR64 748 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 OSGIN1Q9UJX0 560 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 SPIN1Q9Y657 262 aaPredicted RBP15.19■□□□□ 0.02
USHBP1-203ENST00000431146 IRGMA1A4Y4 181 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 OR6C70A6NIJ9 312 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 IMPA2O14732 288 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 CDC40O60508 579 aaKnown RBP eCLIP15.19■□□□□ 0.02
USHBP1-203ENST00000431146 PPM1BO75688 479 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 SERPINI2O75830 405 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 HK1P19367 917 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 LCN1P31025 176 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 OPRL1P41146 370 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 LIMK1P53667 647 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 SLC26A5P58743 744 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 TMEM44Q2T9K0 475 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 BICRALQ6AI39 1079 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 TMEM205Q6UW68 189 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 BPHLQ86WA6 291 aaPredicted RBP15.19■□□□□ 0.02
USHBP1-203ENST00000431146 KISS1RQ969F8 398 aaPredicted RBP15.19■□□□□ 0.02
USHBP1-203ENST00000431146 TMEM203Q969S6 136 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 TP53INP1Q96A56 240 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 TRMT61AQ96FX7 289 aaKnown RBP15.19■□□□□ 0.02
USHBP1-203ENST00000431146 RACGAP1Q9H0H5 632 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 GALNT9Q9HCQ5 603 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 RHBDL2Q9NX52 303 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 SLC39A1Q9NY26 324 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 TNFRSF10DQ9UBN6 386 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 CHRNA9Q9UGM1 479 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 GPN3Q9UHW5 284 aaPredicted RBP15.19■□□□□ 0.02
USHBP1-203ENST00000431146 EXOGQ9Y2C4 368 aaKnown RBP15.19■□□□□ 0.02
USHBP1-203ENST00000431146 EXOSC1Q9Y3B2 195 aaKnown RBP15.19■□□□□ 0.02
USHBP1-203ENST00000431146 ZNF337Q9Y3M9 751 aa15.19■□□□□ 0.02
USHBP1-203ENST00000431146 ALPK2Q86TB3 2170 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 PMS2P1A4D2B8 440 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 J3QRK9 145 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 LALBAP00709 142 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 KLK3P07288 261 aaPredicted RBP15.18■□□□□ 0.02
USHBP1-203ENST00000431146 ZNF3P17036 446 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 RPS5P46782 204 aaKnown RBP15.18■□□□□ 0.02
USHBP1-203ENST00000431146 SLC6A8P48029 635 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 SERPINB10P48595 397 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 LTBQ06643 244 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 MLLT11Q13015 90 aaPredicted RBP15.18■□□□□ 0.02
USHBP1-203ENST00000431146 SF3A2Q15428 464 aaKnown RBP15.18■□□□□ 0.02
USHBP1-203ENST00000431146 ZNF74Q16587 644 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 MOGQ16653 247 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 ANKDD1AQ495B1 522 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 DBX2Q6ZNG2 339 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms