RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 CCBE1Q6UXH8 406 aaPredicted RBP12.77□□□□□ -0.37
HOXC4-202ENST00000430889 VASH1Q7L8A9 365 aaPredicted RBP12.77□□□□□ -0.37
HOXC4-202ENST00000430889 SSX6Q7RTT6 188 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 NR2C2APQ86WQ0 139 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 PLXDC1Q8IUK5 500 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 SIX5Q8N196 739 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 LRRC75AQ8NAA5 344 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 NPEPL1Q8NDH3 523 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 HLA-CQ95604 372 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 TMCO6Q96DC7 493 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 LCORQ96JN0 433 aaPredicted RBP12.77□□□□□ -0.37
HOXC4-202ENST00000430889 PGLYRP3Q96LB9 341 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 TBX5Q99593 518 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 KLHDC3Q9BQ90 382 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 LRRN3Q9H3W5 708 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 TRIM36Q9NQ86 728 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 PNO1Q9NRX1 252 aaKnown RBP12.77□□□□□ -0.37
HOXC4-202ENST00000430889 DHCR7Q9UBM7 475 aaKnown RBP12.77□□□□□ -0.37
HOXC4-202ENST00000430889 ZNF337Q9Y3M9 751 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 PCDHGB2Q9Y5G2 931 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 IER3IP1Q9Y5U9 82 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 EXPH5Q8NEV8 1989 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 C2orf92A0A1B0GVN3 265 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 SMIM30A4D0T7 59 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 CASKO14936 926 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 TO15178 435 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 DUX1O43812 170 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 DLGAP3O95886 979 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 MRPL3P09001 348 aaKnown RBP12.76□□□□□ -0.37
HOXC4-202ENST00000430889 UBL4AP11441 157 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 CFL1P23528 166 aaKnown RBP12.76□□□□□ -0.37
HOXC4-202ENST00000430889 CAPZA2P47755 286 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 AFF3P51826 1226 aaKnown RBP12.76□□□□□ -0.37
HOXC4-202ENST00000430889 PPP3R1P63098 170 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 ACTC1P68032 377 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 ACTA1P68133 377 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 E2F1Q01094 437 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 RIN1Q13671 783 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 EBPQ15125 230 aaKnown RBP12.76□□□□□ -0.37
HOXC4-202ENST00000430889 DMKNQ6E0U4 476 aaPredicted RBP12.76□□□□□ -0.37
HOXC4-202ENST00000430889 WDR74Q6RFH5 385 aaPredicted RBP12.76□□□□□ -0.37
HOXC4-202ENST00000430889 CBLN3Q6UW01 205 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 PXKQ7Z7A4 578 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 KMT5CQ86Y97 462 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 GDPD1Q8N9F7 314 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 ZNF527Q8NB42 609 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 SDR9C7Q8NEX9 313 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 OR52E2Q8NGJ4 325 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 OR5W2Q8NH69 310 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 NDC1Q9BTX1 674 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 NUDT9Q9BW91 350 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 PPIL3Q9H2H8 161 aaKnown RBP12.76□□□□□ -0.37
HOXC4-202ENST00000430889 ST6GALNAC2Q9UJ37 374 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 NOX1Q9Y5S8 564 aa12.76□□□□□ -0.37
HOXC4-202ENST00000430889 LAMA1P25391 3075 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 A0A1B0GVT2 93 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 IDH3BO43837 385 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 GYPBP06028 91 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 CSF3P09919 207 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 PNMTP11086 282 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 TAS2R43P59537 309 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 RPS7P62081 194 aaKnown RBP12.75□□□□□ -0.37
HOXC4-202ENST00000430889 EGR4Q05215 589 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 DMWDQ09019 674 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 TRAM1Q15629 374 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 ZNF74Q16587 644 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 YOD1Q5VVQ6 348 aaPredicted RBP12.75□□□□□ -0.37
HOXC4-202ENST00000430889 NUP54Q7Z3B4 507 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 C9orf40Q8IXQ3 194 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 RFLNBQ8N5W9 214 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 ZNF441Q8N8Z8 693 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 GATSQ8NAP1 163 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 POMGNT2Q8NAT1 580 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 C7orf57Q8NEG2 295 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 IL17RDQ8NFM7 739 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 OR4K13Q8NH42 304 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 ZNRF4Q8WWF5 429 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 ZNF501Q96CX3 271 aaPredicted RBP12.75□□□□□ -0.37
HOXC4-202ENST00000430889 C4orf36Q96KX1 117 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 RTN4RQ9BZR6 473 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 OR8D2Q9GZM6 311 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 PPP1R3EQ9H7J1 279 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 C12orf10Q9HB07 376 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 HIF3AQ9Y2N7 669 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 ADAM18Q9Y3Q7 739 aa12.75□□□□□ -0.37
HOXC4-202ENST00000430889 A0A1W2PQ09 198 aa12.74□□□□□ -0.37
HOXC4-202ENST00000430889 SYNDIG1LA6NDD5 238 aa12.74□□□□□ -0.37
HOXC4-202ENST00000430889 A8MUA0 341 aa12.74□□□□□ -0.37
HOXC4-202ENST00000430889 OGG1O15527 345 aa12.74□□□□□ -0.37
HOXC4-202ENST00000430889 ZNF264O43296 627 aa12.74□□□□□ -0.37
HOXC4-202ENST00000430889 TSPAN2O60636 221 aa12.74□□□□□ -0.37
HOXC4-202ENST00000430889 NCR1O76036 304 aa12.74□□□□□ -0.37
HOXC4-202ENST00000430889 HLA-DQB1P01920 261 aa12.74□□□□□ -0.37
HOXC4-202ENST00000430889 APEHP13798 732 aaKnown RBP12.74□□□□□ -0.37
HOXC4-202ENST00000430889 FBLP22087 321 aaKnown RBP12.74□□□□□ -0.37
HOXC4-202ENST00000430889 PTBP1P26599 531 aaKnown RBP eCLIP12.74□□□□□ -0.37
HOXC4-202ENST00000430889 DIO1P49895 249 aa12.74□□□□□ -0.37
HOXC4-202ENST00000430889 OR12D2P58182 307 aa12.74□□□□□ -0.37
HOXC4-202ENST00000430889 DCAF7P61962 342 aa12.74□□□□□ -0.37
HOXC4-202ENST00000430889 ASAH1Q13510 395 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms