RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 SLC25A43Q8WUT9 341 aaPredicted RBP10.38□□□□□ -0.75
HDAC4-202ENST00000430200 TMEM171Q8WVE6 324 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 WDR60Q8WVS4 1066 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 TMEM234Q8WY98 164 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 TACO1Q9BSH4 297 aaKnown RBP10.38□□□□□ -0.75
HDAC4-202ENST00000430200 MALT1Q9UDY8 824 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 GDF2Q9UK05 429 aaPredicted RBP10.38□□□□□ -0.75
HDAC4-202ENST00000430200 ADAM21Q9UKJ8 722 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 TMED7Q9Y3B3 224 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 CDHR4A6H8M9 788 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 OR5H1A6NKK0 313 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 COL6A5A8TX70 2615 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 INAFM1C9JVW0 142 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 FRS3O43559 492 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 SNUPNO95149 360 aaKnown RBP10.37□□□□□ -0.75
HDAC4-202ENST00000430200 PGM3O95394 542 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 AGR2O95994 175 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 BCHEP06276 602 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 CD3EP07766 207 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 PCSK6P29122 969 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 APOBEC1P41238 236 aaKnown RBP10.37□□□□□ -0.75
HDAC4-202ENST00000430200 ACAA2P42765 397 aaKnown RBP10.37□□□□□ -0.75
HDAC4-202ENST00000430200 P2RY4P51582 365 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 ATP5J2P56134 94 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 HPCAP84074 193 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 LGALS3BPQ08380 585 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 FAPQ12884 760 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 BNIP2Q12982 314 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 PPA1Q15181 289 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 BEND6Q5SZJ8 279 aaPredicted RBP10.37□□□□□ -0.75
HDAC4-202ENST00000430200 C9orf135Q5VTT2 229 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 LRRC74BQ6ZQY2 392 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 DNM1P46Q6ZS02 220 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 ZNF621Q6ZSS3 439 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 GALNT5Q7Z7M9 940 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 CLIP4Q8N3C7 705 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 OR52N5Q8NH56 324 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 OIT3Q8WWZ8 545 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 FBXW5Q969U6 566 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 ARL8AQ96BM9 186 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 TMBIM4Q9HC24 238 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 SDR39U1Q9NRG7 319 aaPredicted RBP10.37□□□□□ -0.75
HDAC4-202ENST00000430200 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.37□□□□□ -0.75
HDAC4-202ENST00000430200 THAP1Q9NVV9 213 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 FLVCR1Q9Y5Y0 555 aa10.37□□□□□ -0.75
HDAC4-202ENST00000430200 KIAA1324LA8MWY0 1029 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-202ENST00000430200 FAAHO00519 579 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 RFXANKO14593 260 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 ABCD4O14678 606 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 TFPTP0C1Z6 253 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 ACVR1BP36896 505 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 CDH11P55287 796 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 OR2B6P58173 313 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 RPS4XP62701 263 aaKnown RBP10.36□□□□□ -0.75
HDAC4-202ENST00000430200 CSNK2A1P68400 391 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-202ENST00000430200 PDK3Q15120 406 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 TSPO2Q5TGU0 170 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 FBXW9Q5XUX1 488 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 NXNQ6DKJ4 435 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 C11orf71Q6IPW1 123 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 SLC2A7Q6PXP3 512 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 SERPINA11Q86U17 422 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 ZNF100Q8IYN0 542 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 ZIC4Q8N9L1 334 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 VPS37AQ8NEZ2 397 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 SMAP2Q8WU79 429 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-202ENST00000430200 SLC38A5Q8WUX1 472 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 HSD17B8Q92506 261 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 HTRA1Q92743 480 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 MAL2Q969L2 176 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 TMEM19Q96HH6 336 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 ZNF385AQ96PM9 386 aaKnown RBP10.36□□□□□ -0.75
HDAC4-202ENST00000430200 TRAF4Q9BUZ4 470 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-202ENST00000430200 HDHD5Q9BXW7 423 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 PAIP1Q9H074 479 aaKnown RBP10.36□□□□□ -0.75
HDAC4-202ENST00000430200 SLCO1B3Q9NPD5 702 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 SERINC1Q9NRX5 453 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 SLC7A10Q9NS82 523 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 SLC25A37Q9NYZ2 338 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 TMEM181Q9P2C4 612 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 SEC14L4Q9UDX3 406 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 LIPT1Q9Y234 373 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 ZNF443Q9Y2A4 671 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-202ENST00000430200 NOSIPQ9Y314 301 aaKnown RBP10.36□□□□□ -0.75
HDAC4-202ENST00000430200 HDGFL3Q9Y3E1 203 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 SLC25A15Q9Y619 301 aa10.36□□□□□ -0.75
HDAC4-202ENST00000430200 MALRD1Q5VYJ5 2156 aa10.35□□□□□ -0.75
HDAC4-202ENST00000430200 A0A096LNT2 108 aa10.35□□□□□ -0.75
HDAC4-202ENST00000430200 TRPC5OSA6NMA1 111 aa10.35□□□□□ -0.75
HDAC4-202ENST00000430200 TMEM229AB2RXF0 380 aa10.35□□□□□ -0.75
HDAC4-202ENST00000430200 E7EQL1 145 aa10.35□□□□□ -0.75
HDAC4-202ENST00000430200 RNF223E7ERA6 249 aa10.35□□□□□ -0.75
HDAC4-202ENST00000430200 SLC22A3O75751 556 aa10.35□□□□□ -0.75
HDAC4-202ENST00000430200 NR2F1P10589 423 aa10.35□□□□□ -0.75
HDAC4-202ENST00000430200 IDO1P14902 403 aa10.35□□□□□ -0.75
HDAC4-202ENST00000430200 GGT1P19440 569 aa10.35□□□□□ -0.75
HDAC4-202ENST00000430200 SLC1A3P43003 542 aa10.35□□□□□ -0.75
HDAC4-202ENST00000430200 ZNF83P51522 516 aa10.35□□□□□ -0.75
HDAC4-202ENST00000430200 POLR2HP52434 150 aaKnown RBP10.35□□□□□ -0.75
HDAC4-202ENST00000430200 DSTNP60981 165 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms