RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 THAP6Q8TBB0 222 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 PRDM7Q9NQW5 492 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 DUSP22Q9NRW4 184 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 A0A0A6YYH2 397 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 A6NIZ1 184 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 A6NJ64 397 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 LILRB5O75023 590 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 GADD45AP24522 165 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 MAP2K4P45985 399 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 RAP1BP61224 184 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 RAP1AP62834 184 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 YBX1P67809 324 aaKnown RBP11.94□□□□□ -0.5
PTCH1-207ENST00000429896 FAM76BQ5HYJ3 339 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 OGFOD3Q6PK18 319 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 SLC16A11Q8NCK7 471 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 RAB2BQ8WUD1 216 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 NRG4Q8WWG1 115 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 DPH1Q9BZG8 443 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 GORASP2Q9H8Y8 452 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 TANC1Q9C0D5 1861 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 CD8B2A6NJW9 211 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 FBP2O00757 339 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 SUSD5O60279 629 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 ENTPD6O75354 484 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 CD8BP10966 210 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 SUN5Q8TC36 379 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 FAM60AQ9NP50 221 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 FBXL4Q9UKA2 621 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 F5P12259 2224 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 ADAP00813 363 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 EDN3P14138 238 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 PSMA6P60900 246 aaKnown RBP11.93□□□□□ -0.5
PTCH1-207ENST00000429896 PDE7AQ13946 482 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 MEDAGQ5VYS4 303 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 UNQ6126/PRO20091Q6UXV3 157 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 ZNF300Q96RE9 604 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-207ENST00000429896 VN1R1Q9GZP7 353 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 A0A087WV62 115 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 OR2J2O76002 312 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 NDUFB2O95178 105 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 RPS5P46782 204 aaKnown RBP11.93□□□□□ -0.5
PTCH1-207ENST00000429896 HNRNPA0Q13151 305 aaKnown RBP11.93□□□□□ -0.5
PTCH1-207ENST00000429896 SAXO2Q658L1 398 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 C3orf33Q6P1S2 294 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 CCDC107Q8WV48 283 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 GATAD2BQ8WXI9 593 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 ZNF649Q9BS31 505 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 SLC22A4Q9H015 551 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 DCSTAMPQ9H295 470 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 CMAHPQ9Y471 501 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 CCRL2O00421 344 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 SLC15A1P46059 708 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 CRISP1P54107 249 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 CCDC58Q4VC31 144 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 LRFN4Q6PJG9 635 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 DCDC5Q6ZRR9 648 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 TPPPO94811 219 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 HPRP00739 348 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 ZNF35P13682 527 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 RNF4P78317 190 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 C5orf46Q6UWT4 87 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 CBLL1Q75N03 491 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 ZFP41Q8N8Y5 198 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 MED16Q9Y2X0 877 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 LNP1A1A4G5 178 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 H2BFMP0C1H6 154 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 PVALBP20472 110 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-207ENST00000429896 TACR3P29371 465 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 ZNF385BQ569K4 471 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 COX20Q5RI15 118 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 LEG1Q6P5S2 330 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 ANKRD37Q7Z713 158 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 TRIM36Q9NQ86 728 aa11.93□□□□□ -0.5
PTCH1-207ENST00000429896 DUSP5Q16690 384 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 MICAQ29983 383 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 C7orf34Q96L11 122 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 QRSL1Q9H0R6 528 aaKnown RBP11.92□□□□□ -0.5
PTCH1-207ENST00000429896 RDH8Q9NYR8 311 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 GMEB1Q9Y692 573 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 B4E171 279 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 C21orf140B9A014 251 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 EIF4E2O60573 245 aaKnown RBP11.92□□□□□ -0.5
PTCH1-207ENST00000429896 TPOP07202 933 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 ZNF883P0CG24 379 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 C7P10643 843 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 TSPAN7P41732 249 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 ST3GAL4Q11206 333 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 ZNF425Q6IV72 752 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 C16orf52Q8NHV5 167 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 ZNF696Q9H7X3 374 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 FAM171A2A8MVW0 826 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 H3BSA7 217 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 IST1P53990 364 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 CHRFAM7AQ494W8 412 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 OR10A4Q9H209 315 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 EMC9Q9Y3B6 208 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 NUP205Q92621 2012 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 FRG2CA6NGY1 282 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 A6NHS1 94 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms