RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 NDUFAF6Q330K2 333 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 ELOA3BQ3SY89 546 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 SLC35D3Q5M8T2 416 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 FAAH2Q6GMR7 532 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 PAMR1Q6UXH9 720 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 MED25Q71SY5 747 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 SPATC1Q76KD6 591 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 SYS1Q8N2H4 156 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 MS4A15Q8N5U1 240 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 C19orf18Q8NEA5 215 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 SDR9C7Q8NEX9 313 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 ELOA3Q8NG57 546 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 OR2T27Q8NH04 317 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 C3orf49Q96BT1 292 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 SOSTQ9BQB4 213 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 NDEL1Q9GZM8 345 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 SPRTNQ9H040 489 aaPredicted RBP12.55□□□□□ -0.4
THBS3-202ENST00000428962 ERVMER34-1Q9H9K5 563 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 MOV10Q9HCE1 1003 aaKnown RBP12.55□□□□□ -0.4
THBS3-202ENST00000428962 ITGB1BP2Q9UKP3 347 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 IER3IP1Q9Y5U9 82 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 SIRT4Q9Y6E7 314 aaPredicted RBP12.55□□□□□ -0.4
THBS3-202ENST00000428962 SHISA3A0PJX4 238 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 MCIDASD6RGH6 385 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 ARPC3O15145 178 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 CCNKO75909 580 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 OR2B3O76000 313 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 NCR1O76036 304 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 HIST1H1CP16403 213 aaKnown RBP12.55□□□□□ -0.4
THBS3-202ENST00000428962 LCN1P31025 176 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 PPICP45877 212 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 NRG3P56975 720 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 RPL6Q02878 288 aaKnown RBP12.55□□□□□ -0.4
THBS3-202ENST00000428962 IL18Q14116 193 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 INSL4Q14641 139 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 PON3Q15166 354 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 CARTPTQ16568 116 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 PRR23CQ6ZRP0 262 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 Q8N402 240 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 OR4K13Q8NH42 304 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 SENP5Q96HI0 755 aaPredicted RBP12.55□□□□□ -0.4
THBS3-202ENST00000428962 GPX7Q96SL4 187 aaPredicted RBP12.55□□□□□ -0.4
THBS3-202ENST00000428962 TTYH2Q9BSA4 534 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 TMEM43Q9BTV4 400 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 YIPF2Q9BWQ6 316 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 PPP1R3EQ9H7J1 279 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 ENAMQ9NRM1 1142 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 PNO1Q9NRX1 252 aaKnown RBP12.55□□□□□ -0.4
THBS3-202ENST00000428962 INIPQ9NRY2 104 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 LANCL2Q9NS86 450 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 ZMIZ1Q9ULJ6 1067 aa12.55□□□□□ -0.4
THBS3-202ENST00000428962 TMEM184BQ9Y519 407 aaPredicted RBP12.55□□□□□ -0.4
THBS3-202ENST00000428962 OR2W5A6NFC9 320 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 FRG2CA6NGY1 282 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 FAM25AB3EWG3 89 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 FAM25CB3EWG5 89 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 FAM25GB3EWG6 89 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 ATP6V1G1O75348 118 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 KRT8P05787 483 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 GYPBP06028 91 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 TRAPPC2P0DI81 140 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 TRAPPC2BP0DI82 140 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 MAOBP27338 520 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 GRK6P43250 576 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 HTR3AP46098 478 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 GBX2P52951 348 aaPredicted RBP12.54□□□□□ -0.4
THBS3-202ENST00000428962 SLC37A1P57057 533 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 SLC3A1Q07837 685 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 IDNKQ5T6J7 187 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 C1QTNF12Q5T7M4 302 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 FNDC7Q5VTL7 733 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 DMKNQ6E0U4 476 aaPredicted RBP12.54□□□□□ -0.4
THBS3-202ENST00000428962 MZT2BQ6NZ67 158 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 TEX19Q8NA77 164 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 ENKURQ8TC29 256 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 NEDD4LQ96PU5 975 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 FBXL4Q9UKA2 621 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 SLC6A5Q9Y345 797 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 MAU2Q9Y6X3 613 aa12.54□□□□□ -0.4
THBS3-202ENST00000428962 LINC00854A0A1B0GVQ3 168 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 PRKAR1AP10644 381 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 PYCR1P32322 319 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 TALDO1P37837 337 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 INPP1P49441 399 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 OR12D2P58182 307 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 DCAF7P61962 342 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 RPS4XP62701 263 aaKnown RBP12.53□□□□□ -0.4
THBS3-202ENST00000428962 HSD11B2P80365 405 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 HSF2Q03933 536 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 ZP2Q05996 745 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 SKP2Q13309 424 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 IL10RAQ13651 578 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 RSBN1Q5VWQ0 802 aaPredicted RBP12.53□□□□□ -0.4
THBS3-202ENST00000428962 TTLL10Q6ZVT0 673 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 CEACAM19Q7Z692 300 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 LRRC28Q86X40 367 aaPredicted RBP12.53□□□□□ -0.4
THBS3-202ENST00000428962 TMEM151BQ8IW70 566 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 SLC35F2Q8IXU6 374 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 OR14A16Q8NHC5 309 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 ABHD4Q8TB40 342 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms