RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 TOR3AQ9H497 397 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 RIBC2Q9H4K1 309 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 CACYBPQ9HB71 228 aaKnown RBP8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 SH3PXD2BA1X283 911 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 KDM4EB2RXH2 506 aaPredicted RBP8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 CD63P08962 238 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 INHBBP09529 407 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 RANBP1P43487 201 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 TMBIM6P55061 237 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 LTBQ06643 244 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 GLYR1Q49A26 553 aaPredicted RBP8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 PRR30Q53SZ7 412 aaPredicted RBP8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 DCST1Q5T197 706 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 BROXQ5VW32 411 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 PRAMEF8Q5VWM4 474 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 PRAMEF7Q5VXH5 474 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 TTC23Q5W5X9 447 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 XAF1Q6GPH4 301 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF770Q6IQ21 691 aaPredicted RBP8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 PGBD2Q6P3X8 592 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 PIWIL3Q7Z3Z3 882 aaKnown RBP8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 RANBP3LQ86VV4 465 aaPredicted RBP8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 SLC30A8Q8IWU4 369 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 CLDN22Q8N7P3 220 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR13C2Q8NGS9 318 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 TBC1D15Q8TC07 691 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 THAP4Q8WY91 577 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZCCHC14Q8WYQ9 949 aaKnown RBP8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 HDAC2Q92769 488 aaKnown RBP8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 RHNO1Q9BSD3 238 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 DCUN1D5Q9BTE7 237 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 NAA50Q9GZZ1 169 aaKnown RBP8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 MED17Q9NVC6 651 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 MRTO4Q9UKD2 239 aaKnown RBP8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 ACAD8Q9UKU7 415 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 TP53TG5Q9Y2B4 290 aa8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 SPTBN1Q01082 2364 aaKnown RBP8.62□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF814B7Z6K7 855 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 SEC14L5O43304 696 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 RAMP1O60894 148 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 P04436 131 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 IFI6P09912 130 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 PRKCAP17252 672 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 CRHBPP24387 322 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 DNAJA1P31689 397 aaKnown RBP8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 TMED10P49755 219 aaKnown RBP8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 CLDN20P56880 219 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 FXYD6P3P58550 94 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 GABARAPL2P60520 117 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 SRYQ05066 204 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 FOXO1Q12778 655 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 LY6DQ14210 128 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 ELOAQ14241 798 aaKnown RBP8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 MICAQ29983 383 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 B3GLCTQ6Y288 498 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 Q6ZNX1 250 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 NUP54Q7Z3B4 507 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 ADGRG3Q86Y34 549 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 KIF18BQ86Y91 864 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 C10orf53Q8N6V4 93 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR2M3Q8NG83 312 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 RASSF5Q8WWW0 418 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 SGCDQ92629 289 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 POP5Q969H6 163 aaKnown RBP8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 PPP1R14BQ96C90 147 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 FUZQ9BT04 418 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 B3GNT4Q9C0J1 378 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 SLC6A15Q9H2J7 730 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 FAM118AQ9NWS6 357 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 KIF17Q9P2E2 1029 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 RALYQ9UKM9 306 aaKnown RBP8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 VPS13CQ709C8 3753 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 A0A1W2PPW3 197 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 TMEM72A0PK05 275 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 TRAPPC13A5PLN9 417 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR5H15A6NDH6 313 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 SYT5O00445 386 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZIC3O60481 467 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 PLGP00747 810 aaPredicted RBP8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 IFI30P13284 250 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 HOXB6P17509 224 aaKnown RBP8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 SLC9A3P48764 834 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 P2RX1P51575 399 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 COPZ1P61923 177 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 NEDD8Q15843 81 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 RAET1LQ5VY80 246 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 SHQ1Q6PI26 577 aaKnown RBP8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 THSD4Q6ZMP0 1018 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 CCDC71Q8IV32 467 aaPredicted RBP8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 C8orf59Q8N0T1 100 aaPredicted RBP8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR2M7Q8NG81 312 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR4K17Q8NGC6 315 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR8D4Q8NGM9 314 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR1J4Q8NGS1 313 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR5W2Q8NH69 310 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 GIPC3Q8TF64 312 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 TAAR8Q969N4 342 aa8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 RBM4BQ9BQ04 359 aaKnown RBP8.61□□□□□ -1.03
HMGCLL1-206ENST00000428842 RBM4Q9BWF3 364 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms