RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 ARPC2O15144 300 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 AQP8O94778 261 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 PRKD3O94806 890 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 TOXO94900 526 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 PNMTP11086 282 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 BMP5P22003 454 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 ENPP1P22413 925 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 CBLP22681 906 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 FKBP2P26885 142 aaKnown RBP13.05□□□□□ -0.32
SGCE-204ENST00000428696 RASSF2P50749 326 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 CSNK2A1P68400 391 aaPredicted RBP13.05□□□□□ -0.32
SGCE-204ENST00000428696 SIRPAP78324 504 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 BNIP1Q12981 228 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 HSPB2Q16082 182 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 DNAL1Q4LDG9 190 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 IFI44LQ53G44 452 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 RIPPLY2Q5TAB7 128 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 TMPPEQ6ZT21 453 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 ATG4DQ86TL0 474 aaPredicted RBP13.05□□□□□ -0.32
SGCE-204ENST00000428696 LSMEM1Q8N8F7 131 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 ZHX1-C8orf76Q96EF9 292 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 HSH2DQ96JZ2 352 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 ADGRG7Q96K78 797 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 UCK2Q9BZX2 261 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 C1orf21Q9H246 121 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 C6orf203Q9P0P8 240 aaPredicted RBP13.05□□□□□ -0.32
SGCE-204ENST00000428696 SLC7A7Q9UM01 511 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 PRPF19Q9UMS4 504 aaKnown RBP13.05□□□□□ -0.32
SGCE-204ENST00000428696 ZNF208O43345 1280 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 IFNW1P05000 195 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 FPR1P21462 350 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 CHRNB4P30926 498 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 IFNA8P32881 189 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 IDUAP35475 653 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 TIMP3P35625 211 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 RPS5P46782 204 aaKnown RBP13.05□□□□□ -0.32
SGCE-204ENST00000428696 CTBP2P56545 445 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 FOXF2Q12947 444 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 PIN1Q13526 163 aaPredicted RBP13.05□□□□□ -0.32
SGCE-204ENST00000428696 OR7A5Q15622 319 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 GTF2IRD2BQ6EKJ0 949 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 OR2A2Q6IF42 318 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 XKRXQ6PP77 449 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 CCDC121Q6ZUS5 278 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 CBLL1Q75N03 491 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 GTF2IRD2Q86UP8 949 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 ARHGAP24Q8N264 748 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 ADAMTS16Q8TE57 1224 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 ITLN2Q8WWU7 325 aaPredicted RBP13.05□□□□□ -0.32
SGCE-204ENST00000428696 CPNE4Q96A23 557 aaPredicted RBP13.05□□□□□ -0.32
SGCE-204ENST00000428696 MCUR1Q96AQ8 359 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 ZNF775Q96BV0 537 aaPredicted RBP13.05□□□□□ -0.32
SGCE-204ENST00000428696 LRGUKQ96M69 825 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 TAPBPLQ9BX59 468 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 GORASP2Q9H8Y8 452 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 DCAF13Q9NV06 445 aaKnown RBP13.05□□□□□ -0.32
SGCE-204ENST00000428696 RHCGQ9UBD6 479 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 CLCF1Q9UBD9 225 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 RIMS3Q9UJD0 308 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 PRDM4Q9UKN5 801 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 SAMD4AQ9UPU9 718 aaKnown RBP13.05□□□□□ -0.32
SGCE-204ENST00000428696 HDGFL3Q9Y3E1 203 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 FAM32AQ9Y421 112 aaKnown RBP13.05□□□□□ -0.32
SGCE-204ENST00000428696 ZNF175Q9Y473 711 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 DIDO1Q9BTC0 2240 aaKnown RBP13.04□□□□□ -0.32
SGCE-204ENST00000428696 TRAPPC13A5PLN9 417 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 MBD3L4A6NDZ8 208 aaPredicted RBP13.04□□□□□ -0.32
SGCE-204ENST00000428696 MBD3L3A6NE82 208 aaPredicted RBP13.04□□□□□ -0.32
SGCE-204ENST00000428696 MBD3L5A6NJ08 208 aaPredicted RBP13.04□□□□□ -0.32
SGCE-204ENST00000428696 TMEM229AB2RXF0 380 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 EEF1E1-BLOC1S5C9J1V9 151 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 EBAG9O00559 213 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 KPNA4O00629 521 aaPredicted RBP13.04□□□□□ -0.32
SGCE-204ENST00000428696 EEF1E1O43324 174 aaKnown RBP13.04□□□□□ -0.32
SGCE-204ENST00000428696 FMO6PO60774 539 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 DNAJC8O75937 253 aaPredicted RBP13.04□□□□□ -0.32
SGCE-204ENST00000428696 SMNDC1O75940 238 aaKnown RBP eCLIP13.04□□□□□ -0.32
SGCE-204ENST00000428696 ATP5HO75947 161 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 RCBTB2O95199 551 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 AHSA1O95433 338 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 FCGR2AP12318 317 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 CTSSP25774 331 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 GTF2E2P29084 291 aaKnown RBP13.04□□□□□ -0.32
SGCE-204ENST00000428696 CLK1P49759 484 aaKnown RBP13.04□□□□□ -0.32
SGCE-204ENST00000428696 MAP2K6P52564 334 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 RAC3P60763 192 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 IL1RL1Q01638 556 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 SPATS1Q496A3 300 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 C1orf140Q5VVS0 124 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 ZNF613Q6PF04 617 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 FCRLAQ7L513 359 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 DHFR2Q86XF0 187 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 LIX1LQ8IVB5 337 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 ZNF808Q8N4W9 903 aaPredicted RBP13.04□□□□□ -0.32
SGCE-204ENST00000428696 NAXEQ8NCW5 288 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 MBD3L2Q8NHZ7 208 aaPredicted RBP13.04□□□□□ -0.32
SGCE-204ENST00000428696 ASB5Q8WWX0 329 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 GEMIN6Q8WXD5 167 aaKnown RBP13.04□□□□□ -0.32
SGCE-204ENST00000428696 SLC7A6OSQ96CW6 309 aaPredicted RBP13.04□□□□□ -0.32
SGCE-204ENST00000428696 SLC41A3Q96GZ6 507 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms