RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 TMEM181Q9P2C4 612 aa10.62□□□□□ -0.71
TTC3-208ENST00000428693 HDGFL3Q9Y3E1 203 aa10.62□□□□□ -0.71
TTC3-208ENST00000428693 TMEM120BA0PK00 339 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 TMEM72A0PK05 275 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 CFAP73A6NFT4 308 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 OR5H1A6NKK0 313 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 HDAC3O15379 428 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 DNAJA2O60884 412 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 TMCC2O75069 709 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 KRT75O95678 551 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 TP53P04637 393 aaPredicted RBP10.61□□□□□ -0.71
TTC3-208ENST00000428693 CDH2P19022 906 aaPredicted RBP10.61□□□□□ -0.71
TTC3-208ENST00000428693 CXCR1P25024 350 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 TACR3P29371 465 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 ACVR1BP36896 505 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 SLC35A1P78382 337 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 MRPL2Q5T653 305 aaKnown RBP10.61□□□□□ -0.71
TTC3-208ENST00000428693 ATG16L1Q676U5 607 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 KLHL17Q6TDP4 642 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 TMEM108Q6UXF1 575 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 CROCCP2Q86T23 111 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 PEX5LQ8IYB4 626 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 DEPDC4Q8N2C3 294 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 FAM71CQ8NEG0 241 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 OR52E4Q8NGH9 312 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 TRIM2Q9C040 744 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 SAP130Q9H0E3 1048 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 SLC38A1Q9H2H9 487 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 MTHFD2LQ9H903 347 aaPredicted RBP10.61□□□□□ -0.71
TTC3-208ENST00000428693 EXOSC3Q9NQT5 275 aaKnown RBP10.61□□□□□ -0.71
TTC3-208ENST00000428693 THAP1Q9NVV9 213 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 NKIRAS1Q9NYS0 192 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 NPAP1Q9NZP6 1156 aa10.61□□□□□ -0.71
TTC3-208ENST00000428693 GDF2Q9UK05 429 aaPredicted RBP10.61□□□□□ -0.71
TTC3-208ENST00000428693 ALPK2Q86TB3 2170 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 TMEM247A6NEH6 219 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 AGAP5A6NIR3 686 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 ZNF716A6NP11 495 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 SSX4O60224 188 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 ADAM11O75078 769 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 NDUFS7O75251 213 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 SLC22A3O75751 556 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 KRT33AO76009 404 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 DBIP07108 87 aaKnown RBP10.6□□□□□ -0.71
TTC3-208ENST00000428693 GUSBP08236 651 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 DANCRP0C864 163 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 GKN3PP0CG01 181 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 PAX1P15863 534 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 NCF2P19878 526 aaPredicted RBP10.6□□□□□ -0.71
TTC3-208ENST00000428693 FKBP2P26885 142 aaKnown RBP10.6□□□□□ -0.71
TTC3-208ENST00000428693 SLC1A3P43003 542 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 COPZ1P61923 177 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 LRRC74AQ0VAA2 488 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 OR7A5Q15622 319 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 C6orf10Q5SRN2 563 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 OGFOD2Q6N063 350 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 LRRC74BQ6ZQY2 392 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 GPAT4Q86UL3 456 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 P2RY8Q86VZ1 359 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 CMIPQ8IY22 773 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 LRRC34Q8IZ02 419 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 OIT3Q8WWZ8 545 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 IGFBPL1Q8WX77 278 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 PMM1Q92871 262 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 RADILQ96JH8 1075 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 RLIMQ9NVW2 624 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 PARPBPQ9NWS1 579 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 TAS2R16Q9NYV7 291 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 P2RX2Q9UBL9 471 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 HAO1Q9UJM8 370 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 OSGIN1Q9UJX0 560 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 GPR45Q9Y5Y3 372 aa10.6□□□□□ -0.71
TTC3-208ENST00000428693 HEATR1Q9H583 2144 aaKnown RBP10.6□□□□□ -0.71
TTC3-208ENST00000428693 IGKV3D-15A0A087WSY6 115 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 SHISA9B4DS77 424 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 EIF1BO60739 113 aaKnown RBP10.59□□□□□ -0.71
TTC3-208ENST00000428693 AKR7A3O95154 331 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 IGHV4-39P01824 125 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 IL6P05231 212 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 BCHEP06276 602 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 IMPDH2P12268 514 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 ETFAP13804 333 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 IDO1P14902 403 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 COX5AP20674 150 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 CLK1P49759 484 aaKnown RBP10.59□□□□□ -0.71
TTC3-208ENST00000428693 FOXG1P55316 489 aaPredicted RBP10.59□□□□□ -0.71
TTC3-208ENST00000428693 WDR4P57081 412 aaKnown RBP10.59□□□□□ -0.71
TTC3-208ENST00000428693 MAGOHP61326 146 aaKnown RBP10.59□□□□□ -0.71
TTC3-208ENST00000428693 SPOCK1Q08629 439 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 BNIP2Q12982 314 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 CEACAM7Q14002 265 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 PDK3Q15120 406 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 ETFDHQ16134 617 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 PGGHGQ32M88 737 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 LIN52Q52LA3 116 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 OTUD3Q5T2D3 398 aaPredicted RBP10.59□□□□□ -0.71
TTC3-208ENST00000428693 AGAP6Q5VW22 663 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 VRK2Q86Y07 508 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 FBXL14Q8N1E6 418 aa10.59□□□□□ -0.71
TTC3-208ENST00000428693 GLB1L3Q8NCI6 653 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms