RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 EPHA3P29320 983 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 CRISP3P54108 245 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 COPZ1P61923 177 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 MPP2Q14168 576 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 SYPL1Q16563 259 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 Q71RC1 249 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 OLIG3Q7RTU3 272 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 ADGRG3Q86Y34 549 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 ZNF433Q8N7K0 673 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 ANKFN1Q8N957 763 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 ZNF524Q96C55 264 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 PIF1Q9H611 641 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 MALT1Q9UDY8 824 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 ZNF232Q9UNY5 417 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 TMED7Q9Y3B3 224 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 MAGED1Q9Y5V3 778 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 ZNF716A6NP11 495 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 C9JVG2 144 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 OVOL3O00110 214 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 CHRM4P08173 479 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 DANCRP0C864 163 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 ZCCHC18P0CG32 403 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 RPS4Y1P22090 263 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 PTAFRP25105 342 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 CDH11P55287 796 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 VEZF1Q14119 521 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 LARS2Q15031 903 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 NRF1Q16656 503 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 CLEC12BQ2HXU8 276 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 MRPL2Q5T653 305 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 AGAP6Q5VW22 663 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 PAQR6Q6TCH4 344 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 CASP12Q6UXS9 341 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 ABHD12BQ7Z5M8 362 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 CIARTQ8N365 385 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 C17orf78Q8N4C9 275 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 C1orf162Q8NEQ5 155 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 KBTBD8Q8NFY9 601 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 CNOT9Q92600 299 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 ZNF775Q96BV0 537 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 ZG16BQ96DA0 208 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 ITCHQ96J02 903 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 MAELQ96JY0 434 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 ARL5BQ96KC2 179 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 TEX37Q96LM6 180 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 TRIM2Q9C040 744 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 RAD21L1Q9H4I0 556 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 WDR55Q9H6Y2 383 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 MANSC1Q9H8J5 431 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 CISD1Q9NZ45 108 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 UPB1Q9UBR1 384 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 OSGIN1Q9UJX0 560 aa13.66□□□□□ -0.22
CTDSP1-202ENST00000428361 PRR14LQ5THK1 2151 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 A0A096LPI6 279 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 GOLGA8QA0A0J9YX86 632 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 GOLGA8OA6NCC3 632 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 DPRXA6NFQ7 191 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 GOLGA8NF8WBI6 632 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 ABCD4O14678 606 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 RAD51DO75771 328 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 GPIP06744 558 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 KITP10721 976 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 PAX7P23759 505 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 CXCR1P25024 350 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 TACR3P29371 465 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 WDR4P57081 412 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 H3F3AP84243 136 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 EPS8Q12929 822 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 MGARPQ8TDB4 240 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 ADAD1Q96M93 576 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 HS6ST2Q96MM7 605 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 INPP5KQ9BT40 448 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 SF3B5Q9BWJ5 86 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 TAPBPLQ9BX59 468 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 OR11A1Q9GZK7 315 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 DCTN4Q9UJW0 460 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 POU2F3Q9UKI9 436 aa13.65□□□□□ -0.22
CTDSP1-202ENST00000428361 PRAMEF27A3QJZ7 478 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 CDHR4A6H8M9 788 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 CLDN24A6NM45 220 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 AP3D1O14617 1153 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 UBDO15205 165 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 BCAS1O75363 584 aaPredicted RBP13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 GSNP06396 782 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 THBS1P07996 1170 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 SOD3P08294 240 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 BMP4P12644 408 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 CCNA2P20248 432 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 IL12AP29459 219 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 CDKN2CP42773 168 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 CRATP43155 626 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 DSTNP60981 165 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 STX1BP61266 288 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 FAPQ12884 760 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 RNF220Q5VTB9 566 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 WBP2NLQ6ICG8 309 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 KLHL24Q6TFL4 600 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 SEZ6L2Q6UXD5 910 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 DTX2Q86UW9 622 aa13.64□□□□□ -0.23
CTDSP1-202ENST00000428361 MIER2Q8N344 545 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms