RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 GBAP04062 536 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 HOXA6P31267 233 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 B4GALNT1Q00973 533 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 CDKN3Q16667 212 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 LY6G6FQ5SQ64 297 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 SDHAF4Q5VUM1 108 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 KLHL31Q9H511 634 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 NEUROD4Q9HD90 331 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 PPP4R1LQ9P1A2 415 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 AK6Q9Y3D8 172 aaKnown RBP14.87□□□□□ -0.03
C9orf3-206ENST00000428313 A0A1W2PPE3 182 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 ARL5CA6NH57 179 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 ACOD1A6NK06 481 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 B3GAT3O94766 335 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 EPPINO95925 133 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 CD160O95971 181 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 APEHP13798 732 aaKnown RBP14.87□□□□□ -0.03
C9orf3-206ENST00000428313 RAB4BP61018 213 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 PPP2CBP62714 309 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 PPP2CAP67775 309 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 ARF5P84085 180 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 SRSF3P84103 164 aaKnown RBP14.87□□□□□ -0.03
C9orf3-206ENST00000428313 TEAD2Q15562 447 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 NDUFAF6Q330K2 333 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 LPCAT3Q6P1A2 487 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 CD300LGQ6UXG3 332 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.87□□□□□ -0.03
C9orf3-206ENST00000428313 SYT9Q86SS6 491 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 GTPBP8Q8N3Z3 284 aaPredicted RBP14.87□□□□□ -0.03
C9orf3-206ENST00000428313 OR4A4PQ8NGN8 299 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 BBS10Q8TAM1 723 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 C14orf79Q96F83 325 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 C14orf144Q96I85 54 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 C4orf36Q96KX1 117 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 TEAD3Q99594 435 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 NRIP2Q9BQI9 281 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 C1orf198Q9H425 327 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 APMAPQ9HDC9 416 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 MIEF1Q9NQG6 463 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 DZANK1Q9NVP4 752 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 C2orf42Q9NWW7 574 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 ST6GALNAC2Q9UJ37 374 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 MOKQ9UQ07 419 aa14.87□□□□□ -0.03
C9orf3-206ENST00000428313 IGLV3-16A0A075B6K0 115 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 RNF222A6NCQ9 220 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 ANTXRLA6NF34 631 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 AP4M1O00189 453 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 ZNF197O14709 1029 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 CLDN7O95471 211 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 SDHAP31040 664 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 ADCYAP1R1P41586 468 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 TAS2R41P59536 307 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 ILF3Q12906 894 aaKnown RBP eCLIP14.86□□□□□ -0.03
C9orf3-206ENST00000428313 PLEKHN1Q494U1 663 aaPredicted RBP14.86□□□□□ -0.03
C9orf3-206ENST00000428313 DUSP28Q4G0W2 176 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 C11orf87Q6NUJ2 197 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 AGTRAPQ6RW13 159 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 TPGS1Q6ZTW0 290 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 OR13C5Q8NGS8 318 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 RNASE11Q8TAA1 199 aaKnown RBP14.86□□□□□ -0.03
C9orf3-206ENST00000428313 C1orf216Q8TAB5 229 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 STOML3Q8TAV4 291 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 PHYHIPQ92561 330 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 KISS1RQ969F8 398 aaPredicted RBP14.86□□□□□ -0.03
C9orf3-206ENST00000428313 PPP1R16AQ96I34 528 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 MAP3K3Q99759 626 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 XKR8Q9H6D3 395 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 GGT3PA6NGU5 568 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 OR5H14A6NHG9 310 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 J3QLW9 94 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 KLF4O43474 513 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 ZNF821O75541 412 aaPredicted RBP14.86□□□□□ -0.03
C9orf3-206ENST00000428313 POMCP01189 267 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 ZNF14P17017 642 aaPredicted RBP14.86□□□□□ -0.03
C9orf3-206ENST00000428313 ZNF19P17023 458 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 XPAP23025 273 aaPredicted RBP14.86□□□□□ -0.03
C9orf3-206ENST00000428313 PDHA2P29803 388 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 PPP2R1BP30154 601 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 RAB5CP51148 216 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 PJVKQ0ZLH3 352 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 SSX2Q16385 188 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 SYPL1Q16563 259 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 VWA2Q5GFL6 755 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 PLBD1Q6P4A8 553 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 DMRTC2Q8IXT2 367 aaPredicted RBP14.86□□□□□ -0.03
C9orf3-206ENST00000428313 ARL6IP6Q8N6S5 226 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 DERL3Q96Q80 235 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 DMRT3Q9NQL9 472 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 TAS2R8Q9NYW2 309 aa14.86□□□□□ -0.03
C9orf3-206ENST00000428313 OGG1O15527 345 aa14.85□□□□□ -0.03
C9orf3-206ENST00000428313 OR2T1O43869 369 aa14.85□□□□□ -0.03
C9orf3-206ENST00000428313 PMS2P2O95744 297 aa14.85□□□□□ -0.03
C9orf3-206ENST00000428313 EPCAMP16422 314 aa14.85□□□□□ -0.03
C9orf3-206ENST00000428313 NDUFV2P19404 249 aa14.85□□□□□ -0.03
C9orf3-206ENST00000428313 DLSTP36957 453 aa14.85□□□□□ -0.03
C9orf3-206ENST00000428313 CSNK1DP48730 415 aa14.85□□□□□ -0.03
C9orf3-206ENST00000428313 SLCO4C1Q6ZQN7 724 aa14.85□□□□□ -0.03
C9orf3-206ENST00000428313 TMPRSS11BQ86T26 416 aa14.85□□□□□ -0.03
C9orf3-206ENST00000428313 CCDC107Q8WV48 283 aa14.85□□□□□ -0.03
C9orf3-206ENST00000428313 TFGQ92734 400 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms