RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 COG8Q96MW5 612 aa9.04□□□□□ -0.96
SNX13-203ENST00000428135 LMF2Q9BU23 707 aaKnown RBP9.04□□□□□ -0.96
SNX13-203ENST00000428135 MS4A8Q9BY19 250 aa9.04□□□□□ -0.96
SNX13-203ENST00000428135 NENFQ9UMX5 172 aa9.04□□□□□ -0.96
SNX13-203ENST00000428135 PAPPAQ13219 1627 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 HOXC11O43248 304 aaPredicted RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 MBTPS2O43462 519 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 GALR3O60755 368 aaPredicted RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 CYB561P49447 251 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 NOVA1P51513 510 aaKnown RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 BTG2P78543 158 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 ACSM3Q53FZ2 586 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 PYCR3Q53H96 274 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 FAM83HQ6ZRV2 1179 aaPredicted RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 PIWIL3Q7Z3Z3 882 aaKnown RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 SERPINA11Q86U17 422 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 SYNPRQ8TBG9 265 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 LCORQ96JN0 433 aaPredicted RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 EMC6Q9BV81 110 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 SUCNR1Q9BXA5 334 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 TINAGL1Q9GZM7 467 aaPredicted RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 SLC6A14Q9UN76 642 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 TIAM2Q8IVF5 1701 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 MAST2Q6P0Q8 1798 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 COL11A2P13942 1736 aaPredicted RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 TMED7-TICAM2A0A0A6YYA0 188 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 A0A1B0GX78 115 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 WNT4P56705 351 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 CLDN12P56749 244 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 DUSP2Q05923 314 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 GK3PQ14409 553 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 GLYR1Q49A26 553 aaPredicted RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 TRMT12Q53H54 448 aaKnown RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 TMEM150AQ86TG1 271 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 OR1N1Q8NGS0 311 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 S100PBPQ96BU1 408 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 TMED7Q9Y3B3 224 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 OR5K3A6NET4 321 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 SERINC4A6NH21 518 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 ZNF705EA8MWA4 302 aaPredicted RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 I3L521 148 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 DVL2O14641 736 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 ARHGEF15O94989 841 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 CTSLP07711 333 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 MMP2P08253 660 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 DHRS4L1P0CG22 281 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 CALCBP10092 127 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 ARSBP15848 533 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 ST6GAL1P15907 406 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 PPP5CP53041 499 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 ZNF616Q08AN1 781 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 SF3B4Q15427 424 aaKnown RBP eCLIP9.03□□□□□ -0.965e-7■■■■□ 22.6
SNX13-203ENST00000428135 TMEM207Q6UWW9 146 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 BPHLQ86WA6 291 aaPredicted RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 OR5AS1Q8N127 324 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 BEST3Q8N1M1 668 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 GPR148Q8TDV2 347 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 ZNF597Q96LX8 424 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 C1QTNF2Q9BXJ5 285 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 EIF5A2Q9GZV4 153 aaKnown RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 ACKR4Q9NPB9 350 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 SLC23A2Q9UGH3 650 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 IGHV3-15A0A0B4J1V0 119 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 TMEM72A0PK05 275 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 AGAP5A6NIR3 686 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 CASC3O15234 703 aaKnown RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 SHOXO15266 292 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 IFNA5P01569 189 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 YES1P07947 543 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 FURINP09958 794 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 RPA2P15927 270 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 MAKP20794 623 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 HLA-DMAP28067 261 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 C21orf33P30042 268 aaPredicted RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 LIM2P55344 173 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 REEP5Q00765 189 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 NKAIN1Q4KMZ8 207 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 TMEM196Q5HYL7 178 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 FAM219BQ5XKK7 198 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 SBSNQ6UWP8 590 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 ZNF687Q8N1G0 1237 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 ENDOVQ8N8Q3 282 aaKnown RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 SLC16A11Q8NCK7 471 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 ACOT11Q8WXI4 607 aaPredicted RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 NMNAT3Q96T66 252 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 WWTR1Q9GZV5 400 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 KCND3Q9UK17 655 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 AKR7A3O95154 331 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 RETP07949 1114 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 HTR3AP46098 478 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 SNRPD2P62316 118 aaKnown RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 MOGQ16653 247 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 OR8J2Q8NGG1 315 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 STOML3Q8TAV4 291 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 VRK1Q99986 396 aaPredicted RBP9.03□□□□□ -0.96
SNX13-203ENST00000428135 MMP27Q9H306 513 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 TAS2R16Q9NYV7 291 aa9.03□□□□□ -0.96
SNX13-203ENST00000428135 SOCS6O14544 535 aa9.02□□□□□ -0.96
SNX13-203ENST00000428135 SLC2A1P11166 492 aa9.02□□□□□ -0.96
SNX13-203ENST00000428135 UGT2B10P36537 528 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms