RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 REEP3Q6NUK4 255 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 TFAP2EQ6VUC0 442 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 CDH24Q86UP0 819 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 SNX32Q86XE0 403 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 ZNF440Q8IYI8 595 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 KCTD12Q96CX2 325 aaKnown RBP12.12□□□□□ -0.47
SNX3-204ENST00000426155 ZC3HAV1LQ96H79 300 aaKnown RBP12.12□□□□□ -0.47
SNX3-204ENST00000426155 WFIKKN1Q96NZ8 548 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 WFDC6Q9BQY6 131 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 PRR14Q9BWN1 585 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 POLDIP3Q9BY77 421 aaKnown RBP12.12□□□□□ -0.47
SNX3-204ENST00000426155 ADAM19Q9H013 955 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 CLEC4MQ9H2X3 399 aaPredicted RBP12.12□□□□□ -0.47
SNX3-204ENST00000426155 PIF1Q9H611 641 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 TMEM38AQ9H6F2 299 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 CACYBPQ9HB71 228 aaKnown RBP12.12□□□□□ -0.47
SNX3-204ENST00000426155 GLRX2Q9NS18 164 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 KLHL14Q9P2G3 628 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 ZNF232Q9UNY5 417 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 CORO2BQ9UQ03 480 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 IFT52Q9Y366 437 aa12.12□□□□□ -0.47
SNX3-204ENST00000426155 SPIN1Q9Y657 262 aaPredicted RBP12.12□□□□□ -0.47
SNX3-204ENST00000426155 A0A1W2PPR1 153 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 FAM221AA4D161 298 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 SIAH2O43255 324 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 ETS2P15036 469 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 HTR2AP28223 471 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 HTR3AP46098 478 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 OR2B6P58173 313 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 TSC22D1Q15714 1073 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 TRMT5Q32P41 509 aaKnown RBP12.11□□□□□ -0.47
SNX3-204ENST00000426155 RABL3Q5HYI8 236 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 TMEM201Q5SNT2 666 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 STAC2Q6ZMT1 411 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 CDC20BQ86Y33 519 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 CCDC103Q8IW40 242 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 TSPEARQ8WU66 669 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 C3orf49Q96BT1 292 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 ELOVL5Q9NYP7 299 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 C6orf203Q9P0P8 240 aaPredicted RBP12.11□□□□□ -0.47
SNX3-204ENST00000426155 KLHL9Q9P2J3 617 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 PRSS50Q9UI38 385 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 ITGB1BP2Q9UKP3 347 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 USP22Q9UPT9 525 aa12.11□□□□□ -0.47
SNX3-204ENST00000426155 CELSR1Q9NYQ6 3014 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 LOC100653049A0A140TA62 436 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 ZNF716A6NP11 495 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 C16orf97H3BN30 126 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 MRASO14807 208 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 GCM2O75603 506 aaPredicted RBP12.1□□□□□ -0.47
SNX3-204ENST00000426155 KRT34O76011 436 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 PMS2P2O95744 297 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 YES1P07947 543 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 SLC6A2P23975 617 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 CXCR1P25024 350 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 PRKAR1BP31321 381 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 GYS2P54840 703 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 PCBP3P57721 371 aaKnown RBP12.1□□□□□ -0.47
SNX3-204ENST00000426155 COPZ1P61923 177 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 CSNK2A1P68400 391 aaPredicted RBP12.1□□□□□ -0.47
SNX3-204ENST00000426155 DAZAP2Q15038 168 aaPredicted RBP12.1□□□□□ -0.47
SNX3-204ENST00000426155 FBXW10Q5XX13 1052 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 GTF2IRD2BQ6EKJ0 949 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 WBP2NLQ6ICG8 309 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 MTDHQ86UE4 582 aaKnown RBP12.1□□□□□ -0.47
SNX3-204ENST00000426155 GTF2IRD2Q86UP8 949 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 SLC43A2Q8N370 569 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 POU5F2Q8N7G0 328 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 SMYD1Q8NB12 490 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 HIPK4Q8NE63 616 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 OR10A6Q8NH74 314 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 DDIT4LQ96D03 193 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 DACH2Q96NX9 599 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 MED18Q9BUE0 208 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 KAT8Q9H7Z6 458 aaKnown RBP12.1□□□□□ -0.47
SNX3-204ENST00000426155 BCO1Q9HAY6 547 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 TMEM181Q9P2C4 612 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 ANGPT4Q9Y264 503 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 HDGFL3Q9Y3E1 203 aa12.1□□□□□ -0.47
SNX3-204ENST00000426155 TMEM229AB2RXF0 380 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 ZNF208O43345 1280 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 HRGP04196 525 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 THBDP07204 575 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 PTNP21246 168 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 FPR1P21462 350 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 GZMMP51124 257 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 SEC24CP53992 1094 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 OR7A5Q15622 319 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 MMEL1Q495T6 779 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 NANOGP8Q6NSW7 305 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 DHRS4L2Q6PKH6 230 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 BEND4Q6ZU67 534 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 NET1Q7Z628 596 aaPredicted RBP12.09□□□□□ -0.47
SNX3-204ENST00000426155 ATG4DQ86TL0 474 aaPredicted RBP12.09□□□□□ -0.47
SNX3-204ENST00000426155 CXorf67Q86X51 503 aaPredicted RBP12.09□□□□□ -0.47
SNX3-204ENST00000426155 KRT73Q86Y46 540 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 C11orf65Q8NCR3 313 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 ARMC7Q9H6L4 198 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 NANOGQ9H9S0 305 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 NDRG3Q9UGV2 375 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms