RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 SLC24A3Q9HC58 644 aa24.14■■□□□ 1.45
LDB1-202ENST00000425280 CHRNA9Q9UGM1 479 aa24.14■■□□□ 1.45
LDB1-202ENST00000425280 IGHV1-45A0A0A0MS14 117 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 PMS2P1A4D2B8 440 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 CDC40O60508 579 aaKnown RBP eCLIP24.13■■□□□ 1.45
LDB1-202ENST00000425280 STK17BO94768 372 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 SCG5P05408 212 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 GP1BBP13224 206 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 ITGADQ13349 1161 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 SSX1Q16384 188 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 C19orf48Q6RUI8 117 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 LYPD8Q6UX82 237 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 MEPCEQ7L2J0 689 aaKnown RBP24.13■■□□□ 1.45
LDB1-202ENST00000425280 MISPQ8IVT2 679 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 SLC37A3Q8NCC5 494 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 MOGAT1Q96PD6 335 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 ERMAPQ96PL5 475 aaPredicted RBP24.13■■□□□ 1.45
LDB1-202ENST00000425280 RACGAP1Q9H0H5 632 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 ZNF700Q9H0M5 742 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 EXOSC1Q9Y3B2 195 aaKnown RBP24.13■■□□□ 1.45
LDB1-202ENST00000425280 PCNX3Q9H6A9 2034 aa24.13■■□□□ 1.45
LDB1-202ENST00000425280 PRR23D1E9PI22 279 aaPredicted RBP24.12■■□□□ 1.45
LDB1-202ENST00000425280 WISP1O95388 367 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 PRR23D2P0DMB1 279 aaPredicted RBP24.12■■□□□ 1.45
LDB1-202ENST00000425280 NOS3P29474 1203 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 TGFBR1P36897 503 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 BTBD16Q32M84 506 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 RAB11FIP2Q7L804 512 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 DEFB126Q9BYW3 111 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 MMP25Q9NPA2 562 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 CCRL2O00421 344 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 OR2J2O76002 312 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 ZNF3P17036 446 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 E2F1Q01094 437 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 CRMP1Q14194 572 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 QPRTQ15274 297 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 ATCAYQ86WG3 371 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 C10orf53Q8N6V4 93 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 RNF138Q8WVD3 245 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 KTI12Q96EK9 354 aaPredicted RBP24.12■■□□□ 1.45
LDB1-202ENST00000425280 OR51E2Q9H255 320 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 TMEM9BQ9NQ34 198 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 CHCHD3Q9NX63 227 aaKnown RBP24.12■■□□□ 1.45
LDB1-202ENST00000425280 PCDHGA3Q9Y5H0 932 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 IER3IP1Q9Y5U9 82 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 HS3ST3B1Q9Y662 390 aa24.12■■□□□ 1.45
LDB1-202ENST00000425280 ZC3H12DA2A288 527 aaKnown RBP24.11■■□□□ 1.45
LDB1-202ENST00000425280 FOXD2O60548 495 aaPredicted RBP24.11■■□□□ 1.45
LDB1-202ENST00000425280 LIMS3P0CW19 117 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 LIMS4P0CW20 117 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 COX6A1P12074 109 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 CXCR1P25024 350 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 CLK1P49759 484 aaKnown RBP24.11■■□□□ 1.45
LDB1-202ENST00000425280 LTBQ06643 244 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 DBPQ10586 325 aaPredicted RBP24.11■■□□□ 1.45
LDB1-202ENST00000425280 C1DQ13901 141 aaKnown RBP24.11■■□□□ 1.45
LDB1-202ENST00000425280 ISXQ2M1V0 245 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 COL28A1Q2UY09 1125 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 B3GLCTQ6Y288 498 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 DPY19L2P2Q6ZN68 376 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 NUP54Q7Z3B4 507 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 TBC1D15Q8TC07 691 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 TTC9Q92623 222 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 TMEM129A0AVI4 362 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 C2orf72A6NCS6 295 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 M0R3G1 203 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 CDK4P11802 303 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 RPL4P36578 427 aaKnown RBP24.11■■□□□ 1.45
LDB1-202ENST00000425280 SOX3P41225 446 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 POMZP3Q6PJE2 187 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 CYB561A3Q8NBI2 242 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 KISS1RQ969F8 398 aaPredicted RBP24.11■■□□□ 1.45
LDB1-202ENST00000425280 IMMP1LQ96LU5 166 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 NANSQ9NR45 359 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 PISDQ9UG56 409 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 ADAM18Q9Y3Q7 739 aa24.11■■□□□ 1.45
LDB1-202ENST00000425280 CCDC182A6NF36 153 aa24.1■■□□□ 1.45
LDB1-202ENST00000425280 IFNGP01579 166 aa24.1■■□□□ 1.45
LDB1-202ENST00000425280 PRPS1P60891 318 aa24.1■■□□□ 1.45
LDB1-202ENST00000425280 DYNC1I2Q13409 638 aaKnown RBP24.1■■□□□ 1.45
LDB1-202ENST00000425280 CDCP2Q5VXM1 449 aa24.1■■□□□ 1.45
LDB1-202ENST00000425280 SIRT6Q8N6T7 355 aa24.1■■□□□ 1.45
LDB1-202ENST00000425280 SUMF1Q8NBK3 374 aa24.1■■□□□ 1.45
LDB1-202ENST00000425280 MOSPD2Q8NHP6 518 aa24.1■■□□□ 1.45
LDB1-202ENST00000425280 SLC22A8Q8TCC7 542 aa24.1■■□□□ 1.45
LDB1-202ENST00000425280 GALNT9Q9HCQ5 603 aa24.1■■□□□ 1.45
LDB1-202ENST00000425280 TAS2R10Q9NYW0 307 aa24.1■■□□□ 1.45
LDB1-202ENST00000425280 IGHA1P01876 353 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 CELA2AP08217 269 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 ASAH2BP0C7U1 165 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 HIST1H1CP16403 213 aaKnown RBP24.09■■□□□ 1.45
LDB1-202ENST00000425280 SLC2A5P22732 501 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 FOLR3P41439 243 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 LIMK1P53667 647 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 WNT4P56705 351 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 C17orf67Q0P5P2 114 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 MLLT11Q13015 90 aaPredicted RBP24.09■■□□□ 1.45
LDB1-202ENST00000425280 KLHL12Q53G59 568 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 OR2G6Q5TZ20 316 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 OR5M10Q6IEU7 315 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms