RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 KCNJ10P78508 379 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 SLC17A1Q14916 467 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 PGS1Q32NB8 556 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 TSPO2Q5TGU0 170 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 SAXO2Q658L1 398 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 KLHL17Q6TDP4 642 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 PIGXQ8TBF5 258 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 XAGE5Q8WWM1 108 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 FAM168AQ92567 244 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 CNOT9Q92600 299 aaKnown RBP13.11□□□□□ -0.31
ATG4B-209ENST00000425239 ROPN1LQ96C74 230 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 TUBGCP3Q96CW5 907 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 SLC35G5Q96KT7 338 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 KCNK17Q96T54 332 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 SLC17A5Q9NRA2 495 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 POLE3Q9NRF9 147 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 TMEM181Q9P2C4 612 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 LGALS13Q9UHV8 139 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 DCTN4Q9UJW0 460 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 SLC35A3Q9Y2D2 325 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 PRSS51A0A1B0GVH4 220 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 CCT8L1PA6NM43 557 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 M0R1B8 84 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 AP3D1O14617 1153 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 ITM2AO43736 263 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 TYROBPO43914 113 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 BPGMP07738 259 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 UQCRC2P22695 453 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 APOBEC3AP31941 199 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-209ENST00000425239 RYKP34925 604 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 SOAT1P35610 550 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 CASP8Q14790 479 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 CYB5R2Q6BCY4 276 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 HMGN2P46Q86SG4 172 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 C1orf162Q8NEQ5 155 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-209ENST00000425239 C20orf27Q9GZN8 174 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 AKTIPQ9H8T0 292 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 EXD2Q9NVH0 621 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 OSGIN1Q9UJX0 560 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 WDR45Q9Y484 360 aa13.1□□□□□ -0.31
ATG4B-209ENST00000425239 TLDC2A0PJX2 215 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 TMEM72A0PK05 275 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 ZC3H12DA2A288 527 aaKnown RBP13.09□□□□□ -0.31
ATG4B-209ENST00000425239 SLC35F4A4IF30 521 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 HMGN4O00479 90 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 ZNF208O43345 1280 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 NUDT17P0C025 328 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 TFPIP10646 304 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 IDH2P48735 452 aaKnown RBP13.09□□□□□ -0.31
ATG4B-209ENST00000425239 MAD2L1Q13257 205 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-209ENST00000425239 TNFAIP8L2Q6P589 184 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-209ENST00000425239 C16orf62Q7Z3J2 963 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 ANKRD46Q86W74 232 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 C17orf78Q8N4C9 275 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 ZNF563Q8TA94 476 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 NEURL3Q96EH8 262 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 ZIM3Q96PE6 472 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 PRR14Q9BWN1 585 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 BEX2Q9BXY8 128 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 ADAM19Q9H013 955 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 SLC38A1Q9H2H9 487 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 NOP53Q9NZM5 478 aaKnown RBP13.09□□□□□ -0.31
ATG4B-209ENST00000425239 POU2F3Q9UKI9 436 aa13.09□□□□□ -0.31
ATG4B-209ENST00000425239 SPIN1Q9Y657 262 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-209ENST00000425239 TMED7-TICAM2A0A0A6YYA0 188 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 AGR2O95994 175 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 USF1P22415 310 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-209ENST00000425239 IGFBP5P24593 272 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 MAGEA8P43361 318 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 P2RY4P51582 365 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 OR2B6P58173 313 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 LSM11P83369 360 aaKnown RBP eCLIP13.08□□□□□ -0.32
ATG4B-209ENST00000425239 MAPK11Q15759 364 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 C1QTNF12Q5T7M4 302 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 C9orf135Q5VTT2 229 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 OR4A15Q8NGL6 344 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 TMEM45BQ96B21 275 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 TESCQ96BS2 214 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 ZHX1-C8orf76Q96EF9 292 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 ZNF385AQ96PM9 386 aaKnown RBP13.08□□□□□ -0.32
ATG4B-209ENST00000425239 PARPBPQ9NWS1 579 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 TMED7Q9Y3B3 224 aa13.08□□□□□ -0.32
ATG4B-209ENST00000425239 AGAP5A6NIR3 686 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 ATP6V1G2-DDX39BF2Z307 99 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 FAAHO00519 579 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 LMX1BO60663 402 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 EIF1BO60739 113 aaKnown RBP13.07□□□□□ -0.32
ATG4B-209ENST00000425239 ZNF16P17020 682 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-209ENST00000425239 CCNA2P20248 432 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 RPS4Y1P22090 263 aaKnown RBP13.07□□□□□ -0.32
ATG4B-209ENST00000425239 TACR3P29371 465 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 SLC1A3P43003 542 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 HTR3AP46098 478 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 SLC35A1P78382 337 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 SRSF2Q01130 221 aaKnown RBP13.07□□□□□ -0.32
ATG4B-209ENST00000425239 SYPL1Q16563 259 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 PAQR6Q6TCH4 344 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 DEPDC4Q8N2C3 294 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 RIBC1Q8N443 379 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-209ENST00000425239 ARFGAP2Q8N6H7 521 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms