RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SLC7A1P30825 629 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 UQCRFS1P47985 274 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 CLK1P49759 484 aaKnown RBP15.27■□□□□ 0.04
COL7A1-202ENST00000422991 ST3GAL3Q11203 375 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 OR2V1Q8NHB1 315 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 RNF217Q8TC41 542 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 STK35Q8TDR2 534 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 RELTQ969Z4 430 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 RSRC1Q96IZ7 334 aaKnown RBP15.27■□□□□ 0.04
COL7A1-202ENST00000422991 ARL5BQ96KC2 179 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 OR5B2Q96R09 309 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 PIP5K1AQ99755 562 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 TUBA1CQ9BQE3 449 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 TMEM43Q9BTV4 400 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 ZNF426Q9BUY5 554 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 FNDC11Q9BVV2 318 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 MAN2C1Q9NTJ4 1040 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 TINAGQ9UJW2 476 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 FAM32AQ9Y421 112 aaKnown RBP15.27■□□□□ 0.04
COL7A1-202ENST00000422991 ARHGAP21Q5T5U3 1957 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 A0A1W2PNR3 127 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 WDR1O75083 606 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 MT-ND1P03886 318 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 STSP08842 583 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 TFPIP10646 304 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 HOXB6P17509 224 aaKnown RBP15.26■□□□□ 0.03
COL7A1-202ENST00000422991 FUT4P22083 530 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 GNLYP22749 145 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 IFNA8P32881 189 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 EGR4Q05215 589 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 MYBPHQ13203 477 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 ACSF3Q4G176 576 aaPredicted RBP15.26■□□□□ 0.03
COL7A1-202ENST00000422991 C1orf140Q5VVS0 124 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 HBMQ6B0K9 141 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 ZNF585AQ6P3V2 769 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 DOLPP1Q86YN1 238 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 PIK3C3Q8NEB9 887 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 OR10D3Q8NH80 312 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 ZPLD1Q8TCW7 415 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 DHRS1Q96LJ7 313 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 POTEKPQ9BYX7 375 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 TP63Q9H3D4 680 aaPredicted RBP15.26■□□□□ 0.03
COL7A1-202ENST00000422991 RHCGQ9UBD6 479 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 AURKCQ9UQB9 309 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 OSGIN2Q9Y236 505 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 HDGFL3Q9Y3E1 203 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 RELNP78509 3460 aa15.26■□□□□ 0.03
COL7A1-202ENST00000422991 FLNBO75369 2602 aaKnown RBP15.25■□□□□ 0.03
COL7A1-202ENST00000422991 AHRRA9YTQ3 701 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 H1F0P07305 194 aaKnown RBP15.25■□□□□ 0.03
COL7A1-202ENST00000422991 GABRA1P14867 456 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 PTNP21246 168 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 ACVR2AP27037 513 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 PTGER4P35408 488 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 RBM34P42696 430 aaKnown RBP15.25■□□□□ 0.03
COL7A1-202ENST00000422991 CA7P43166 264 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 EIF1AXP47813 144 aaKnown RBP15.25■□□□□ 0.03
COL7A1-202ENST00000422991 ACTR3P61158 418 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 RPS3AP61247 264 aaKnown RBP15.25■□□□□ 0.03
COL7A1-202ENST00000422991 KPNB1Q14974 876 aaKnown RBP15.25■□□□□ 0.03
COL7A1-202ENST00000422991 TRAM2Q15035 370 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 PDSS1Q5T2R2 415 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 C1QL3Q5VWW1 255 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 C5orf46Q6UWT4 87 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 ADGRE4PQ86SQ3 457 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 NKAIN4Q8IVV8 208 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 PAPD5Q8NDF8 572 aaKnown RBP15.25■□□□□ 0.03
COL7A1-202ENST00000422991 TMEM255BQ8WV15 326 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 SLCO4A1Q96BD0 722 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 ZNF845Q96IR2 970 aaPredicted RBP15.25■□□□□ 0.03
COL7A1-202ENST00000422991 ZNF347Q96SE7 839 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 ANKRD19PQ9H560 264 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 NMNAT1Q9HAN9 279 aaPredicted RBP15.25■□□□□ 0.03
COL7A1-202ENST00000422991 CCM2LQ9NUG4 571 aaPredicted RBP15.25■□□□□ 0.03
COL7A1-202ENST00000422991 FAM215AQ9Y5M1 114 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 HIVEP3Q5T1R4 2406 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 ESPL1Q14674 2120 aa15.25■□□□□ 0.03
COL7A1-202ENST00000422991 PHF3Q92576 2039 aaKnown RBP15.24■□□□□ 0.03
COL7A1-202ENST00000422991 A0A1W2PRQ8 180 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 CLCA1A8K7I4 914 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 CXCL13O43927 109 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 PMS2P2O95744 297 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 HOXD4P09016 255 aaPredicted RBP15.24■□□□□ 0.03
COL7A1-202ENST00000422991 IMPDH2P12268 514 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 IDUAP35475 653 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 DIO1P49895 249 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 CASP6P55212 293 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 SPIBQ01892 262 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 DGCR6Q14129 220 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 SF3B4Q15427 424 aaKnown RBP eCLIP15.24■□□□□ 0.03
COL7A1-202ENST00000422991 C1orf185Q5T7R7 199 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 RTL6Q6ICC9 239 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 TMPPEQ6ZT21 453 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 P3H2Q8IVL5 708 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 KTI12Q96EK9 354 aaPredicted RBP15.24■□□□□ 0.03
COL7A1-202ENST00000422991 DNAJA3Q96EY1 480 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 DUS3LQ96G46 650 aaKnown RBP15.24■□□□□ 0.03
COL7A1-202ENST00000422991 UCN2Q96RP3 112 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 PTDSS2Q9BVG9 487 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 CHID1Q9BWS9 393 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms