RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 MMEL1Q495T6 779 aa23.5■■□□□ 1.35
CDK9-202ENST00000421939 REP15Q6BDI9 236 aa23.5■■□□□ 1.35
CDK9-202ENST00000421939 ABLIM2Q6H8Q1 611 aa23.5■■□□□ 1.35
CDK9-202ENST00000421939 NUFIP2Q7Z417 695 aaKnown RBP23.5■■□□□ 1.35
CDK9-202ENST00000421939 NET1Q7Z628 596 aaPredicted RBP23.5■■□□□ 1.35
CDK9-202ENST00000421939 MTDHQ86UE4 582 aaKnown RBP23.5■■□□□ 1.35
CDK9-202ENST00000421939 LSRQ86X29 649 aaPredicted RBP23.5■■□□□ 1.35
CDK9-202ENST00000421939 SNX32Q86XE0 403 aa23.5■■□□□ 1.35
CDK9-202ENST00000421939 RSPO3Q9BXY4 272 aaPredicted RBP23.5■■□□□ 1.35
CDK9-202ENST00000421939 CLEC4MQ9H2X3 399 aaPredicted RBP23.5■■□□□ 1.35
CDK9-202ENST00000421939 TMEM181Q9P2C4 612 aa23.5■■□□□ 1.35
CDK9-202ENST00000421939 TRAPPC4Q9Y296 219 aa23.5■■□□□ 1.35
CDK9-202ENST00000421939 ZC3H12DA2A288 527 aaKnown RBP23.49■■□□□ 1.35
CDK9-202ENST00000421939 PRORSD1PA6NEY8 169 aa23.49■■□□□ 1.35
CDK9-202ENST00000421939 FXYD1O00168 92 aa23.49■■□□□ 1.35
CDK9-202ENST00000421939 MRASO14807 208 aa23.49■■□□□ 1.35
CDK9-202ENST00000421939 OR2B6P58173 313 aa23.49■■□□□ 1.35
CDK9-202ENST00000421939 HOXC5Q00444 222 aa23.49■■□□□ 1.35
CDK9-202ENST00000421939 CYLC2Q14093 348 aaPredicted RBP23.49■■□□□ 1.35
CDK9-202ENST00000421939 TFAP2EQ6VUC0 442 aa23.49■■□□□ 1.35
CDK9-202ENST00000421939 CDH24Q86UP0 819 aa23.49■■□□□ 1.35
CDK9-202ENST00000421939 COMTD1Q86VU5 262 aa23.49■■□□□ 1.35
CDK9-202ENST00000421939 POLDIP3Q9BY77 421 aaKnown RBP23.49■■□□□ 1.35
CDK9-202ENST00000421939 FANCFQ9NPI8 374 aa23.49■■□□□ 1.35
CDK9-202ENST00000421939 OTOGQ6ZRI0 2925 aa23.49■■□□□ 1.35
CDK9-202ENST00000421939 CCDC168Q8NDH2 2452 aa23.49■■□□□ 1.35
CDK9-202ENST00000421939 SLC22A2O15244 555 aa23.48■■□□□ 1.35
CDK9-202ENST00000421939 SERPINB7O75635 380 aa23.48■■□□□ 1.35
CDK9-202ENST00000421939 GOSR1O95249 250 aa23.48■■□□□ 1.35
CDK9-202ENST00000421939 PCBP3P57721 371 aaKnown RBP23.48■■□□□ 1.35
CDK9-202ENST00000421939 BEND4Q6ZU67 534 aa23.48■■□□□ 1.35
CDK9-202ENST00000421939 ARMC8Q8IUR7 673 aa23.48■■□□□ 1.35
CDK9-202ENST00000421939 C3orf49Q96BT1 292 aa23.48■■□□□ 1.35
CDK9-202ENST00000421939 LRRC58Q96CX6 371 aa23.48■■□□□ 1.35
CDK9-202ENST00000421939 ZNF300Q96RE9 604 aaPredicted RBP23.48■■□□□ 1.35
CDK9-202ENST00000421939 MED18Q9BUE0 208 aa23.48■■□□□ 1.35
CDK9-202ENST00000421939 KLHL4Q9C0H6 718 aa23.48■■□□□ 1.35
CDK9-202ENST00000421939 KLHL28Q9NXS3 571 aa23.48■■□□□ 1.35
CDK9-202ENST00000421939 ZNF724A8MTY0 619 aa23.47■■□□□ 1.35
CDK9-202ENST00000421939 TPST1O60507 370 aa23.47■■□□□ 1.35
CDK9-202ENST00000421939 IMPDH2P12268 514 aa23.47■■□□□ 1.35
CDK9-202ENST00000421939 PCGF2P35227 344 aa23.47■■□□□ 1.35
CDK9-202ENST00000421939 SLC35A1P78382 337 aa23.47■■□□□ 1.35
CDK9-202ENST00000421939 GLIPR1L2Q4G1C9 344 aa23.47■■□□□ 1.35
CDK9-202ENST00000421939 NANOGP8Q6NSW7 305 aa23.47■■□□□ 1.35
CDK9-202ENST00000421939 BHLHE22Q8NFJ8 381 aaPredicted RBP23.47■■□□□ 1.35
CDK9-202ENST00000421939 OR10A6Q8NH74 314 aa23.47■■□□□ 1.35
CDK9-202ENST00000421939 PIGXQ8TBF5 258 aa23.47■■□□□ 1.35
CDK9-202ENST00000421939 WFIKKN1Q96NZ8 548 aa23.47■■□□□ 1.35
CDK9-202ENST00000421939 NANOGQ9H9S0 305 aa23.47■■□□□ 1.35
CDK9-202ENST00000421939 EMC3Q9P0I2 261 aa23.47■■□□□ 1.35
CDK9-202ENST00000421939 ARMCX1Q9P291 453 aa23.47■■□□□ 1.35
CDK9-202ENST00000421939 SLC13A4Q9UKG4 626 aa23.47■■□□□ 1.35
CDK9-202ENST00000421939 IGKV3D-15A0A087WSY6 115 aa23.46■■□□□ 1.35
CDK9-202ENST00000421939 CASKO14936 926 aa23.46■■□□□ 1.35
CDK9-202ENST00000421939 NPPAP01160 153 aa23.46■■□□□ 1.35
CDK9-202ENST00000421939 IDUAP35475 653 aa23.46■■□□□ 1.35
CDK9-202ENST00000421939 ABCA4P78363 2273 aa23.46■■□□□ 1.35
CDK9-202ENST00000421939 PDK3Q15120 406 aa23.46■■□□□ 1.35
CDK9-202ENST00000421939 FBXW10Q5XX13 1052 aa23.46■■□□□ 1.35
CDK9-202ENST00000421939 STAC2Q6ZMT1 411 aa23.46■■□□□ 1.35
CDK9-202ENST00000421939 ATG4DQ86TL0 474 aaPredicted RBP23.46■■□□□ 1.35
CDK9-202ENST00000421939 SLC30A8Q8IWU4 369 aa23.46■■□□□ 1.35
CDK9-202ENST00000421939 OR8J3Q8NGG0 315 aa23.46■■□□□ 1.35
CDK9-202ENST00000421939 SH3GL1Q99961 368 aa23.46■■□□□ 1.35
CDK9-202ENST00000421939 POTEKPQ9BYX7 375 aa23.46■■□□□ 1.35
CDK9-202ENST00000421939 LOC100653049A0A140TA62 436 aa23.45■■□□□ 1.34
CDK9-202ENST00000421939 A8MVM7 634 aa23.45■■□□□ 1.34
CDK9-202ENST00000421939 ZNF814B7Z6K7 855 aa23.45■■□□□ 1.34
CDK9-202ENST00000421939 EIF1BO60739 113 aaKnown RBP23.45■■□□□ 1.34
CDK9-202ENST00000421939 KRT34O76011 436 aa23.45■■□□□ 1.34
CDK9-202ENST00000421939 MFN2O95140 757 aa23.45■■□□□ 1.34
CDK9-202ENST00000421939 DMTNQ08495 405 aa23.45■■□□□ 1.34
CDK9-202ENST00000421939 BNIP2Q12982 314 aa23.45■■□□□ 1.34
CDK9-202ENST00000421939 RABL3Q5HYI8 236 aa23.45■■□□□ 1.34
CDK9-202ENST00000421939 PCYOX1LQ8NBM8 494 aa23.45■■□□□ 1.34
CDK9-202ENST00000421939 RPS6KB2Q9UBS0 482 aa23.45■■□□□ 1.34
CDK9-202ENST00000421939 ZNF716A6NP11 495 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 TMEM229AB2RXF0 380 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 CCDC22O60826 627 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 FPR1P21462 350 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 HTR2AP28223 471 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 OR3A2P47893 321 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 GZMMP51124 257 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 RGS8P57771 180 aaPredicted RBP23.44■■□□□ 1.34
CDK9-202ENST00000421939 NCALDP61601 193 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 H3F3AP84243 136 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 ANKRD34AQ69YU3 496 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 SPATA21Q7Z572 469 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 GALNT5Q7Z7M9 940 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 CDC20BQ86Y33 519 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 GABRG1Q8N1C3 465 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 SMYD1Q8NB12 490 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 ZNF775Q96BV0 537 aaPredicted RBP23.44■■□□□ 1.34
CDK9-202ENST00000421939 GID8Q9NWU2 228 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 ZNF226Q9NYT6 803 aa23.44■■□□□ 1.34
CDK9-202ENST00000421939 TESQ9UGI8 421 aaKnown RBP23.44■■□□□ 1.34
CDK9-202ENST00000421939 AKAP6Q13023 2319 aa23.43■■□□□ 1.34
CDK9-202ENST00000421939 LIPT2A6NK58 231 aa23.43■■□□□ 1.34
CDK9-202ENST00000421939 RAMP1O60894 148 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms