RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 OR52B2Q96RD2 323 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 TREX2Q9BQ50 279 aaPredicted RBP6.23□□□□□ -1.41
HMGN1-205ENST00000419378 CALHM2Q9HA72 323 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 HHATLQ9HCP6 504 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 BTNL2Q9UIR0 455 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 PCDHGB4Q9UN71 923 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 USH1CQ9Y6N9 552 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 HCFC1P51610 2035 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 POLQO75417 2590 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 AKAP9Q99996 3911 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 DOCK7Q96N67 2140 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 PCNX3Q9H6A9 2034 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 A0A1W2PQD3 144 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 PRSS29PA6NIE9 313 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 CLCA1A8K7I4 914 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 NPIPB9F8W1W9 429 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 SEC14L5O43304 696 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 HCRTR2O43614 444 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 DIAPH2O60879 1101 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 SLC43A1O75387 559 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 SOX30O94993 753 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 AK1P00568 194 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 PEPDP12955 493 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 IDO1P14902 403 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 ZNF17P17021 662 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 MATN1P21941 496 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 BMP5P22003 454 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 UQCRC2P22695 453 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 SLC6A2P23975 617 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 SLC7A1P30825 629 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 CDKN2CP42773 168 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 CASP9P55211 416 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 BCL2A1Q16548 175 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 TMEM44Q2T9K0 475 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 GLYR1Q49A26 553 aaPredicted RBP6.22□□□□□ -1.41
HMGN1-205ENST00000419378 PDCD4Q53EL6 469 aaKnown RBP6.22□□□□□ -1.41
HMGN1-205ENST00000419378 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGN1-205ENST00000419378 SAXO2Q658L1 398 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 ARSKQ6UWY0 536 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 PLXDC2Q6UX71 529 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 GDF7Q7Z4P5 450 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 MISPQ8IVT2 679 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 UBQLNLQ8IYU4 475 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 ZNF527Q8NB42 609 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 CHDHQ8NE62 594 aaPredicted RBP6.22□□□□□ -1.41
HMGN1-205ENST00000419378 GOT1L1Q8NHS2 421 aaPredicted RBP6.22□□□□□ -1.41
HMGN1-205ENST00000419378 B4GALNT2Q8NHY0 566 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 MIPOL1Q8TD10 442 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 ACTRT2Q8TDY3 377 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 DYDC1Q8WWB3 177 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 NEURL3Q96EH8 262 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 SH3YL1Q96HL8 342 aaPredicted RBP6.22□□□□□ -1.41
HMGN1-205ENST00000419378 CCDC115Q96NT0 180 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 OR52E6Q96RD3 313 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 SDF2Q99470 211 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 ZBTB18Q99592 522 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 KLHDC3Q9BQ90 382 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 PIGQQ9BRB3 760 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 SLC35A5Q9BS91 424 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 INPP5KQ9BT40 448 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 SSBP3Q9BWW4 388 aaPredicted RBP6.22□□□□□ -1.41
HMGN1-205ENST00000419378 HOXD1Q9GZZ0 328 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 OR51I1Q9H343 314 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 SLCO1B3Q9NPD5 702 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 SDR39U1Q9NRG7 319 aaPredicted RBP6.22□□□□□ -1.41
HMGN1-205ENST00000419378 MED17Q9NVC6 651 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 CLCF1Q9UBD9 225 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 SLC45A2Q9UMX9 530 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 VDAC3Q9Y277 283 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 ZNF337Q9Y3M9 751 aa6.22□□□□□ -1.41
HMGN1-205ENST00000419378 A0A087WZY1 265 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 CENPVL1A0A0U1RR11 272 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 DUXAA6NLW8 204 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 H0YC42 278 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 H3BNH8 94 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 UBDO15205 165 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 POLR3GO15318 223 aaPredicted RBP6.21□□□□□ -1.42
HMGN1-205ENST00000419378 FRS3O43559 492 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 KIAA0513O60268 411 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 FCMRO60667 390 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 STX11O75558 287 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 SLC22A3O75751 556 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 TGM6O95932 706 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 AGR2O95994 175 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 C1QCP02747 245 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 IL6P05231 212 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 TMIGD3P0DMS9 266 aaPredicted RBP6.21□□□□□ -1.42
HMGN1-205ENST00000419378 OR12D1P0DN82 309 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 PSMA4P25789 261 aaKnown RBP6.21□□□□□ -1.42
HMGN1-205ENST00000419378 CHI3L1P36222 383 aaPredicted RBP6.21□□□□□ -1.42
HMGN1-205ENST00000419378 KHKP50053 298 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 ASCL1P50553 236 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF41P51814 821 aaPredicted RBP6.21□□□□□ -1.42
HMGN1-205ENST00000419378 SUCLG1P53597 346 aaKnown RBP6.21□□□□□ -1.42
HMGN1-205ENST00000419378 ATP12AP54707 1039 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 TPD52P55327 224 aaPredicted RBP6.21□□□□□ -1.42
HMGN1-205ENST00000419378 DLX5P56178 289 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 CLDN15P56746 228 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 CLDN20P56880 219 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms