RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 ZHX1-C8orf76Q96EF9 292 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 FAM71F1Q96KD3 344 aaPredicted RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 PPP3R2Q96LZ3 170 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ZNF599Q96NL3 588 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 AGAP4Q96P64 663 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 MBOAT4Q96T53 435 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 EGFL8Q99944 293 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 MRPL45Q9BRJ2 306 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 FICDQ9BVA6 458 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 GON7Q9BXV9 100 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 DGCR6LQ9BY27 220 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 DERL2Q9GZP9 239 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 SLIRPQ9GZT3 109 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 CCDC90BQ9GZT6 254 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 NXF2Q9GZY0 626 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 SLC25A51Q9H1U9 297 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 WDR13Q9H1Z4 485 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 DCSTAMPQ9H295 470 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 TMEM245Q9H330 911 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 DUSP21Q9H596 190 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ALG9Q9H6U8 611 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ACTR8Q9H981 624 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 MARCH7Q9H992 704 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 IL1RL2Q9HB29 575 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 NTN4Q9HB63 628 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 C3orf14Q9HBI5 128 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 MYOZ2Q9NPC6 264 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 CHST11Q9NPF2 352 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 HEBP1Q9NRV9 189 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 RGS18Q9NS28 235 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 PIGVQ9NUD9 493 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 PLCXD1Q9NUJ7 323 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 TAS2R13Q9NYV9 303 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 STMN3Q9NZ72 180 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 MDFICQ9P1T7 246 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 OR12D3Q9UGF7 316 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ENOPH1Q9UHY7 261 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 CDH9Q9ULB4 789 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 SAMD4AQ9UPU9 718 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 CFL2Q9Y281 166 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 CAB39Q9Y376 341 aaPredicted RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 MFHAS1Q9Y4C4 1052 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 HES2Q9Y543 173 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 LIPGQ9Y5X9 500 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 NRCAMQ92823 1304 aa2.34□□□□□ -2.04
VPS41-206ENST00000418457 SCN8AQ9UQD0 1980 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 A0A075B6Q4 140 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 A0A087WW49 117 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ATP6AP2A0A1C7CYW4 349 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 A0A1W2PPK0 400 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 METTL15A6NJ78 407 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ASB14A6NK59 587 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 SUPT3HB4E1H0 165 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 H3BMM5 538 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 TMX2-CTNND1H3BSU7 103 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 PSMD11O00231 422 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 SLC28A1O00337 649 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 CXCR6O00574 342 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 PIRO00625 290 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 UBFD1O14562 309 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 PRMT5O14744 637 aaPredicted RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 ARHGEF9O43307 516 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 AIREO43918 545 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 MPZL2O60487 215 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 VPS26AO75436 327 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ATP6AP2O75787 350 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 EPOP01588 193 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 RAF1P04049 648 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 FGF1P05230 155 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 HTR1AP08908 422 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 MMP10P09238 476 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 SLC2A3P11169 496 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 DARSP14868 501 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 KCNE1P15382 129 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 CD1EP15812 388 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 CD36P16671 472 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ARF4P18085 180 aaPredicted RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 HLA-DPA1P20036 260 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 PTAFRP25105 342 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 PSMB9P28065 219 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ERP29P30040 261 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 RRM2P31350 389 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 HNF4AP41235 474 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 MAGEA2P43356 314 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 NKX2-1P43699 371 aaPredicted RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 ZFP36L2P47974 494 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 GMPSP49915 693 aaPredicted RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 STC1P52823 247 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 RAB25P57735 213 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 OR2B6P58173 313 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 OR4D2P58180 307 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 MRPS15P82914 257 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 PMP22Q01453 160 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 IFITM2Q01629 132 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 SP3Q02447 781 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 YWHAHQ04917 246 aaPredicted RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 ZNF33BQ06732 778 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 MZT1Q08AG7 82 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 GRB7Q14451 532 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 CDK10Q15131 360 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms