RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 PRKAR1BP31321 381 aa18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 ARFIP2P53365 341 aa18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 MTPNP58546 118 aa18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 HOXC5Q00444 222 aa18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 LARS2Q15031 903 aaKnown RBP18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 ZSWIM7Q19AV6 140 aa18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 EXOC3L2Q2M3D2 409 aa18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 REEP3Q6NUK4 255 aa18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 ATG4DQ86TL0 474 aaPredicted RBP18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 C10orf82Q8WW14 230 aa18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 KAT8Q9H7Z6 458 aaKnown RBP18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 TRAPPC4Q9Y296 219 aa18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 SPIN1Q9Y657 262 aaPredicted RBP18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 TPST2O60704 377 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 FZD7O75084 574 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 PSMB1P20618 241 aaKnown RBP18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 MDH1P40925 334 aaKnown RBP18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 P2RY4P51582 365 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 MAP2K6P52564 334 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 CRYBA2P53672 197 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 SLC16A1P53985 500 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 CSNK2A1P68400 391 aaPredicted RBP18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 RASGEF1BQ0VAM2 473 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 SF3A3Q12874 501 aaKnown RBP eCLIP18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 KLF10Q13118 480 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 SCARB2Q14108 478 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 WBP2NLQ6ICG8 309 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 SEZ6L2Q6UXD5 910 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 BEND4Q6ZU67 534 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 CCDC103Q8IW40 242 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 REXO5Q96IC2 774 aaKnown RBP18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 KLHL9Q9P2J3 617 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 CORO2BQ9UQ03 480 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 RAI1Q7Z5J4 1906 aaPredicted RBP18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 HIVEP1P15822 2718 aa18.29■□□□□ 0.52
PKNOX1-202ENST00000418336 ENO4A6NNW6 628 aa18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 TROVE2P10155 538 aaKnown RBP eCLIP18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 TFPIP10646 304 aa18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 OR3A2P47893 321 aa18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 BNIP2Q12982 314 aa18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 CAPRIN1Q14444 709 aaKnown RBP18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 TMEM201Q5SNT2 666 aa18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 ANKRD34AQ69YU3 496 aa18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 C6orf89Q6UWU4 347 aa18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 TACO1Q9BSH4 297 aaKnown RBP18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 POTEKPQ9BYX7 375 aa18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 C6orf203Q9P0P8 240 aaPredicted RBP18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 TMEM181Q9P2C4 612 aa18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 KLHL14Q9P2G3 628 aa18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 NDRG3Q9UGV2 375 aa18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 PRSS50Q9UI38 385 aa18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 ZNF232Q9UNY5 417 aa18.28■□□□□ 0.52
PKNOX1-202ENST00000418336 TMEM247A6NEH6 219 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 LIPT2A6NK58 231 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 ANGPT2O15123 496 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 MFN2O95140 757 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 VIMP08670 466 aaKnown RBP18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 KCNJ5P48544 419 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 IST1P53990 364 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 EGR4Q05215 589 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 DMTNQ08495 405 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 CXorf67Q86X51 503 aaPredicted RBP18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 LSMEM1Q8N8F7 131 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 NINJ1Q92982 152 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 ZNF775Q96BV0 537 aaPredicted RBP18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 DDIT4LQ96D03 193 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 HS3ST6Q96QI5 342 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 KLHL4Q9C0H6 718 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 OR10A4Q9H209 315 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 ST6GALNAC2Q9UJ37 374 aa18.27■□□□□ 0.52
PKNOX1-202ENST00000418336 EVPLLA8MZ36 301 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 C5orf58C9J3I9 102 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 KLF4O43474 513 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 UQCRBP14927 111 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 NFYCQ13952 458 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 POU4F3Q15319 338 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 TSC22D1Q15714 1073 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 COQ5Q5HYK3 327 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 NANOGP8Q6NSW7 305 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 CALHM3Q86XJ0 350 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 CADM2Q8N3J6 435 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 HIPK4Q8NE63 616 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 GPR32P1Q8NGA4 272 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 PTDSS2Q9BVG9 487 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 PRR14Q9BWN1 585 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 CXXC4Q9H2H0 198 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 NANOGQ9H9S0 305 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 GPR52Q9Y2T5 361 aa18.26■□□□□ 0.51
PKNOX1-202ENST00000418336 PRRC2AP48634 2157 aaKnown RBP18.25■□□□□ 0.51
PKNOX1-202ENST00000418336 FTCDNL1E5RQL4 147 aa18.25■□□□□ 0.51
PKNOX1-202ENST00000418336 FPR1P21462 350 aa18.25■□□□□ 0.51
PKNOX1-202ENST00000418336 SLC6A2P23975 617 aa18.25■□□□□ 0.51
PKNOX1-202ENST00000418336 AQP1P29972 269 aa18.25■□□□□ 0.51
PKNOX1-202ENST00000418336 RBBP4Q09028 425 aa18.25■□□□□ 0.51
PKNOX1-202ENST00000418336 SLC17A1Q14916 467 aa18.25■□□□□ 0.51
PKNOX1-202ENST00000418336 TRMT5Q32P41 509 aaKnown RBP18.25■□□□□ 0.51
PKNOX1-202ENST00000418336 SFRP5Q5T4F7 317 aa18.25■□□□□ 0.51
PKNOX1-202ENST00000418336 REP15Q6BDI9 236 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms