RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 A0A0G2JND7 137 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 A0A1W2PP18 115 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 TMEM72A0PK05 275 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 EVPLLA8MZ36 301 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 GPR171O14626 319 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 ADAP00813 363 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 THBDP07204 575 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 HOXB9P17482 250 aaPredicted RBP13.6□□□□□ -0.23
NUP50-204ENST00000417702 CXCR1P25024 350 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 OR3A2P47893 321 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 SLC35A1P78382 337 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 ZNF311Q5JNZ3 666 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 PAGE3Q5JUK9 113 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 SFRP5Q5T4F7 317 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 ABLIM2Q6H8Q1 611 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 WBP2NLQ6ICG8 309 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 C22orf34Q6ZV56 151 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 WFDC8Q8IUA0 241 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 CLIP4Q8N3C7 705 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 KISS1RQ969F8 398 aaPredicted RBP13.6□□□□□ -0.23
NUP50-204ENST00000417702 DNAJA3Q96EY1 480 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 USB1Q9BQ65 265 aaKnown RBP13.6□□□□□ -0.23
NUP50-204ENST00000417702 ADAM19Q9H013 955 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 SLC52A3Q9NQ40 469 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 FGFR1OP2Q9NVK5 253 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 VAPAQ9P0L0 249 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 SLAMF8Q9P0V8 285 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.6□□□□□ -0.23
NUP50-204ENST00000417702 HIVEP1P15822 2718 aa13.6□□□□□ -0.23
NUP50-204ENST00000417702 ARID1AO14497 2285 aa13.59□□□□□ -0.23
NUP50-204ENST00000417702 IGKV3D-15A0A087WSY6 115 aa13.59□□□□□ -0.23
NUP50-204ENST00000417702 EIF1BO60739 113 aaKnown RBP13.59□□□□□ -0.23
NUP50-204ENST00000417702 GCM2O75603 506 aaPredicted RBP13.59□□□□□ -0.23
NUP50-204ENST00000417702 PGM3O95394 542 aa13.59□□□□□ -0.23
NUP50-204ENST00000417702 ETS2P15036 469 aa13.59□□□□□ -0.23
NUP50-204ENST00000417702 ACAA2P42765 397 aaKnown RBP13.59□□□□□ -0.23
NUP50-204ENST00000417702 NR1H2P55055 460 aa13.59□□□□□ -0.23
NUP50-204ENST00000417702 ITGADQ13349 1161 aa13.59□□□□□ -0.23
NUP50-204ENST00000417702 DEFB113Q30KQ7 82 aa13.59□□□□□ -0.23
NUP50-204ENST00000417702 ALKBH2Q6NS38 261 aa13.59□□□□□ -0.23
NUP50-204ENST00000417702 Q6ZT83 130 aa13.59□□□□□ -0.23
NUP50-204ENST00000417702 KRT73Q86Y46 540 aa13.59□□□□□ -0.23
NUP50-204ENST00000417702 MSRB3Q8IXL7 192 aa13.59□□□□□ -0.23
NUP50-204ENST00000417702 S100PBPQ96BU1 408 aa13.59□□□□□ -0.23
NUP50-204ENST00000417702 NAA11Q9BSU3 229 aaPredicted RBP13.59□□□□□ -0.23
NUP50-204ENST00000417702 POTEKPQ9BYX7 375 aa13.59□□□□□ -0.23
NUP50-204ENST00000417702 LEF1Q9UJU2 399 aaPredicted RBP13.59□□□□□ -0.23
NUP50-204ENST00000417702 NOSIPQ9Y314 301 aaKnown RBP13.59□□□□□ -0.23
NUP50-204ENST00000417702 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.58□□□□□ -0.24
NUP50-204ENST00000417702 ZNF814B7Z6K7 855 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 ANGPT2O15123 496 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 KLF4O43474 513 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 CNOT4O95628 575 aaKnown RBP13.58□□□□□ -0.24
NUP50-204ENST00000417702 ARAFP10398 606 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 FPR1P21462 350 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 CDK6Q00534 326 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 TSC22D1Q15714 1073 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 REEP3Q6NUK4 255 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 BHLHA15Q7RTS1 189 aaPredicted RBP13.58□□□□□ -0.24
NUP50-204ENST00000417702 NFKBIDQ8NI38 313 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 HSD17B8Q92506 261 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 SLC35B4Q969S0 331 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 SPATA5L1Q9BVQ7 753 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 UBTD1Q9HAC8 227 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 NGBQ9NPG2 151 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 BEX4Q9NWD9 120 aaPredicted RBP13.58□□□□□ -0.24
NUP50-204ENST00000417702 PRSS50Q9UI38 385 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 NDUFAF1Q9Y375 327 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 GMEB1Q9Y692 573 aa13.58□□□□□ -0.24
NUP50-204ENST00000417702 ITPR3Q14573 2671 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 TRBV5-3A0A0A0MS03 114 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 ZC3H12DA2A288 527 aaKnown RBP13.57□□□□□ -0.24
NUP50-204ENST00000417702 ZNF716A6NP11 495 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 MRPL33O75394 65 aaKnown RBP13.57□□□□□ -0.24
NUP50-204ENST00000417702 GPIP06744 558 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 IMPDH2P12268 514 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 PRG2P13727 222 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 GPX2P18283 190 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 CD53P19397 219 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 SLC6A2P23975 617 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 PRKAR1BP31321 381 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 IDUAP35475 653 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 ARFIP2P53365 341 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 SLC16A1P53985 500 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 CAPRIN1Q14444 709 aaKnown RBP13.57□□□□□ -0.24
NUP50-204ENST00000417702 ACKR1Q16570 336 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 METTL21CQ5VZV1 264 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 C20orf204Q6ZNR8 217 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 SERPINA11Q86U17 422 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 CCDC103Q8IW40 242 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 UBE2J2Q8N2K1 259 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 PIGTQ969N2 578 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 APH1AQ96BI3 265 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 PLPPR2Q96GM1 343 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 HS3ST6Q96QI5 342 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 TAPBPLQ9BX59 468 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 TMEM120AQ9BXJ8 343 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 CHST2Q9Y4C5 530 aa13.57□□□□□ -0.24
NUP50-204ENST00000417702 HRNRQ86YZ3 2850 aaPredicted RBP13.56□□□□□ -0.24
NUP50-204ENST00000417702 A8MVM7 634 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms