RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 ZFP3Q96NJ6 502 aa11.17□□□□□ -0.62
SKA1-203ENST00000417656 ZNF559Q9BR84 538 aa11.17□□□□□ -0.62
SKA1-203ENST00000417656 TRIM2Q9C040 744 aa11.17□□□□□ -0.62
SKA1-203ENST00000417656 RNF122Q9H9V4 155 aa11.17□□□□□ -0.62
SKA1-203ENST00000417656 NDE1Q9NXR1 346 aa11.17□□□□□ -0.62
SKA1-203ENST00000417656 PLEKHB1Q9UF11 243 aaPredicted RBP11.17□□□□□ -0.62
SKA1-203ENST00000417656 EGFL7Q9UHF1 273 aa11.17□□□□□ -0.62
SKA1-203ENST00000417656 ICE1Q9Y2F5 2266 aa11.17□□□□□ -0.62
SKA1-203ENST00000417656 SPTBN1Q01082 2364 aaKnown RBP11.17□□□□□ -0.62
SKA1-203ENST00000417656 INTS1Q8N201 2190 aaKnown RBP11.16□□□□□ -0.62
SKA1-203ENST00000417656 A0A0B4J2E0 115 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 A0A1B0GX12 115 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 ELOA3DA6NLF2 546 aaPredicted RBP11.16□□□□□ -0.62
SKA1-203ENST00000417656 CPSF4LA6NMK7 179 aaKnown RBP11.16□□□□□ -0.62
SKA1-203ENST00000417656 B2RBV5 119 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 C19orf84I3L1E1 186 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 SMAD9O15198 467 aaKnown RBP11.16□□□□□ -0.62
SKA1-203ENST00000417656 UBOX5O94941 541 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 IFNA14P01570 189 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 T-ENOLP0DO92 83 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 GGT1P19440 569 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 CALB2P22676 271 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 HTR1EP28566 365 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 CPOXP36551 454 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 MNAT1P51948 309 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 OR1Q1Q15612 314 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 SLC25A35Q3KQZ1 300 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 ELOA3BQ3SY89 546 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 ALG10BQ5I7T1 473 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 HIST2H2BCQ6DN03 193 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 OR2A2Q6IF42 318 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 C6orf89Q6UWU4 347 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 RINLQ6ZS11 566 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 TMPPEQ6ZT21 453 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 LSMEM1Q8N8F7 131 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 CNEP1R1Q8N9A8 125 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 RBM15BQ8NDT2 890 aaKnown RBP11.16□□□□□ -0.62
SKA1-203ENST00000417656 ELOA3Q8NG57 546 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 LILRB4Q8NHJ6 448 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 RNF128Q8TEB7 428 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 ABHD3Q8WU67 409 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 FAM162AQ96A26 154 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 DDIT4LQ96D03 193 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 TPD52L3Q96J77 140 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 MCHR1Q99705 422 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 SFXN3Q9BWM7 321 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 EVA1AQ9H8M9 152 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 TIGARQ9NQ88 270 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 BAG5Q9UL15 447 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 CLEC4AQ9UMR7 237 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 SLC9A8Q9Y2E8 581 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 SH3GLB1Q9Y371 365 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 HDGFL3Q9Y3E1 203 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 MPDZO75970 2070 aa11.16□□□□□ -0.62
SKA1-203ENST00000417656 UTP20O75691 2785 aaKnown RBP11.15□□□□□ -0.62
SKA1-203ENST00000417656 EEF1E1-BLOC1S5C9J1V9 151 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 SULT2B1O00204 365 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 EEF1E1O43324 174 aaKnown RBP11.15□□□□□ -0.62
SKA1-203ENST00000417656 FMO6PO60774 539 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 TNFSF13O75888 250 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 PMS2P2O95744 297 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 ZNF682O95780 498 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 IL18BPO95998 194 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 PLGP00747 810 aaPredicted RBP11.15□□□□□ -0.62
SKA1-203ENST00000417656 SERPINA1P01009 418 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 IMPDH2P12268 514 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 HSD17B1P14061 328 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 TCN1P20061 433 aaPredicted RBP11.15□□□□□ -0.62
SKA1-203ENST00000417656 PTNP21246 168 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 ENPP1P22413 925 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 COL8A1P27658 744 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 OPRM1P35372 400 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 OR1E2P47887 323 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 OR2B6P58173 313 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 RAC3P60763 192 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 CSNK2A1P68400 391 aaPredicted RBP11.15□□□□□ -0.62
SKA1-203ENST00000417656 GUSBP1Q15486 140 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 ENTPD8Q5MY95 495 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 SAMD4BQ5PRF9 694 aaKnown RBP11.15□□□□□ -0.62
SKA1-203ENST00000417656 VWA1Q6PCB0 445 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 DEF8Q6ZN54 512 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 FCRLAQ7L513 359 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 TSPYL5Q86VY4 417 aaPredicted RBP11.15□□□□□ -0.62
SKA1-203ENST00000417656 RNF217Q8TC41 542 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 DNAJA4Q8WW22 397 aaPredicted RBP11.15□□□□□ -0.62
SKA1-203ENST00000417656 CDRT15Q96T59 188 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 TMEM27Q9HBJ8 222 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 KCNJ16Q9NPI9 418 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 ADPRHL2Q9NX46 363 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 ZNF629Q9UEG4 869 aaPredicted RBP11.15□□□□□ -0.62
SKA1-203ENST00000417656 PRDM4Q9UKN5 801 aa11.15□□□□□ -0.62
SKA1-203ENST00000417656 KLF2Q9Y5W3 355 aaPredicted RBP11.15□□□□□ -0.62
SKA1-203ENST00000417656 HCFC1P51610 2035 aa11.14□□□□□ -0.63
SKA1-203ENST00000417656 HECTD1Q9ULT8 2610 aa11.14□□□□□ -0.63
SKA1-203ENST00000417656 IGKV1D-42A0A075B6H8 117 aa11.14□□□□□ -0.63
SKA1-203ENST00000417656 A8MVM7 634 aa11.14□□□□□ -0.63
SKA1-203ENST00000417656 SS18L1O75177 396 aaPredicted RBP11.14□□□□□ -0.63
SKA1-203ENST00000417656 AHSA1O95433 338 aa11.14□□□□□ -0.63
SKA1-203ENST00000417656 CRHP06850 196 aa11.14□□□□□ -0.63
SKA1-203ENST00000417656 FKBP2P26885 142 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms