RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 TP53BP2Q13625 1128 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 ZNF672Q499Z4 452 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-202ENST00000416769 EXOSC6Q5RKV6 272 aaKnown RBP11.43□□□□□ -0.58
LINC00339-202ENST00000416769 CDC73Q6P1J9 531 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 CBLN3Q6UW01 205 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 C16orf89Q6UX73 402 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 DNAJC14Q6Y2X3 702 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-202ENST00000416769 SZRD1Q7Z422 152 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 HIPK1Q86Z02 1210 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 CLEC4FQ8N1N0 589 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 ATP6V1C2Q8NEY4 427 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 OR8J3Q8NGG0 315 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 ZNF775Q96BV0 537 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-202ENST00000416769 SLC35G5Q96KT7 338 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 KLHL15Q96M94 604 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 TACO1Q9BSH4 297 aaKnown RBP11.43□□□□□ -0.58
LINC00339-202ENST00000416769 TRIM2Q9C040 744 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 NPAP1Q9NZP6 1156 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-202ENST00000416769 ING1Q9UK53 422 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-202ENST00000416769 FAF1Q9UNN5 650 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-202ENST00000416769 CORO2BQ9UQ03 480 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 AP3M1Q9Y2T2 418 aa11.43□□□□□ -0.58
LINC00339-202ENST00000416769 SHISA9B4DS77 424 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 LYZL6O75951 148 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 KCNK2O95069 426 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 CD3EP07766 207 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 LINGO3P0C6S8 592 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 SLC6A2P23975 617 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 IL32P24001 234 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 IDUAP35475 653 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 CLK3P49761 638 aaKnown RBP11.42□□□□□ -0.58
LINC00339-202ENST00000416769 RASSF2P50749 326 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 ANXA11P50995 505 aaKnown RBP11.42□□□□□ -0.58
LINC00339-202ENST00000416769 MVDP53602 400 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 PSME3P61289 254 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 MXRA7P84157 204 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 ZNF117Q03924 483 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 FADDQ13158 208 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 LASP1Q14847 261 aaKnown RBP11.42□□□□□ -0.58
LINC00339-202ENST00000416769 RGNQ15493 299 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 ZNHIT3Q15649 155 aaPredicted RBP11.42□□□□□ -0.58
LINC00339-202ENST00000416769 KRTAP24-1Q3LI83 254 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 SFRP5Q5T4F7 317 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 RINLQ6ZS11 566 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 CCDC121Q6ZUS5 278 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 ESPNLQ6ZVH7 1005 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 ARPINQ7Z6K5 226 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 RNF130Q86XS8 419 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 PGAM4Q8N0Y7 254 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 LILRA2Q8N149 483 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 ADAMTS15Q8TE58 950 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 STACQ99469 402 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 CPPED1Q9BRF8 314 aaPredicted RBP11.42□□□□□ -0.58
LINC00339-202ENST00000416769 TRAF4Q9BUZ4 470 aaPredicted RBP11.42□□□□□ -0.58
LINC00339-202ENST00000416769 THUMPD3Q9BV44 507 aaKnown RBP11.42□□□□□ -0.58
LINC00339-202ENST00000416769 PIGUQ9H490 435 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 DUSP22Q9NRW4 184 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 THUMPD1Q9NXG2 353 aaKnown RBP11.42□□□□□ -0.58
LINC00339-202ENST00000416769 TAS2R1Q9NYW7 299 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 KLHL13Q9P2N7 655 aa11.42□□□□□ -0.58
LINC00339-202ENST00000416769 A0A1W2PNR3 127 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 C7orf72A4D263 438 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 SSX4O60224 188 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 AGR2O95994 175 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 C1QCP02747 245 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 TP53P04637 393 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-202ENST00000416769 ALOX5P09917 674 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 BMP2P12643 396 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 ADH6P28332 368 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 ZNF41P51814 821 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-202ENST00000416769 CARD18P57730 90 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 SLC25A3Q00325 362 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 STK11Q15831 433 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.41□□□□□ -0.58
LINC00339-202ENST00000416769 STK32CQ86UX6 486 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 SLC15A3Q8IY34 581 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 ARIH2OSQ8N7S6 290 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 RBM15BQ8NDT2 890 aaKnown RBP11.41□□□□□ -0.58
LINC00339-202ENST00000416769 STEAP2Q8NFT2 490 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 FBXO27Q8NI29 283 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 FAM110BQ8TC76 370 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 SLC7A6OSQ96CW6 309 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-202ENST00000416769 TRMT61AQ96FX7 289 aaKnown RBP11.41□□□□□ -0.58
LINC00339-202ENST00000416769 AURKBQ96GD4 344 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-202ENST00000416769 OR7D2Q96RA2 312 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 ZNF300Q96RE9 604 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-202ENST00000416769 OR51I1Q9H343 314 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 KAT8Q9H7Z6 458 aaKnown RBP11.41□□□□□ -0.58
LINC00339-202ENST00000416769 B3GALT5Q9Y2C3 310 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 KCNE3Q9Y6H6 103 aa11.41□□□□□ -0.58
LINC00339-202ENST00000416769 A0A087WZY1 265 aa11.4□□□□□ -0.58
LINC00339-202ENST00000416769 A0A1W2PR80 420 aa11.4□□□□□ -0.58
LINC00339-202ENST00000416769 A8MV72 311 aaPredicted RBP11.4□□□□□ -0.58
LINC00339-202ENST00000416769 TMCC2O75069 709 aa11.4□□□□□ -0.58
LINC00339-202ENST00000416769 OR12D1P0DN82 309 aa11.4□□□□□ -0.58
LINC00339-202ENST00000416769 CRATP43155 626 aa11.4□□□□□ -0.58
LINC00339-202ENST00000416769 KHKP50053 298 aa11.4□□□□□ -0.58
LINC00339-202ENST00000416769 GZMMP51124 257 aa11.4□□□□□ -0.58
LINC00339-202ENST00000416769 PSMD4P55036 377 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms