RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 OMPP47874 163 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 BDH1Q02338 343 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 TEAD2Q15562 447 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 TMEM69Q5SWH9 247 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 TSSK4Q6SA08 328 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 HTR3DQ70Z44 454 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 MRGPREQ86SM8 312 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 VRK2Q86Y07 508 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 TMEM151BQ8IW70 566 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 OR6S1Q8NH40 331 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 TMEM255BQ8WV15 326 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 F2RL3Q96RI0 385 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 ZBP1Q9H171 429 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 CCDC86Q9H6F5 360 aaKnown RBP13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 TMEM231Q9H6L2 316 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 WSB2Q9NYS7 404 aaPredicted RBP13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 MOKQ9UQ07 419 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 ATG2BQ96BY7 2078 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 LRIT2A6NDA9 550 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 FAM25EA8MYX2 175 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 NEDD8-MDP1E9PL57 170 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 SULT1C2O00338 296 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 CDC42EP2O14613 210 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 PLPP2O43688 288 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 AQP8O94778 261 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 PAK4O96013 591 aaPredicted RBP13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 CTSAP10619 480 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 EPCAMP16422 314 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 NDUFV2P19404 249 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 MPGP29372 298 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 TRHRP34981 398 aaPredicted RBP13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 MAGEB1P43366 347 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 PDZK1IP1Q13113 114 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 ZNF311Q5JNZ3 666 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 UBE2NLQ5JXB2 153 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 RAB12Q6IQ22 244 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 H3F3CQ6NXT2 135 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 FAM83HQ6ZRV2 1179 aaPredicted RBP13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 MUC20Q8N307 709 aaPredicted RBP13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 C12orf76Q8N812 135 aaPredicted RBP13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 OR2AK2Q8NG84 335 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 OR6K3Q8NGY3 331 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 OR56A3Q8NH54 315 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 RXFP4Q8TDU9 374 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 SMPDL3BQ92485 455 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 PEX11GQ96HA9 241 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 UBQLN3Q9H347 655 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 ZDHHC6Q9H6R6 413 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 SIRT3Q9NTG7 399 aaPredicted RBP13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 ZMIZ1Q9ULJ6 1067 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 PCDHB10Q9UN67 800 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 SPTBP11277 2137 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 SCN8AQ9UQD0 1980 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 NAP1L6A6NFF2 107 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 GABARAPH6UMI1 98 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 SULT1B1O43704 296 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 STX4Q12846 297 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 NIPAL3Q6P499 406 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 MEPCEQ7L2J0 689 aaKnown RBP13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 TMEM25Q86YD3 366 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 ZNF285Q96NJ3 590 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 NEUROD4Q9HD90 331 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 RASL12Q9NYN1 266 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 MIOXQ9UGB7 285 aa13.6□□□□□ -0.23
NCKIPSD-204ENST00000416649 TMEM218A2RU14 115 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 MEIS3P1A6NDR6 274 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 IGSF6O95976 241 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 S100A6P06703 90 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 ST3GAL3Q11203 375 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 NDUFAF6Q330K2 333 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 ZNF620Q6ZNG0 422 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 CAMKVQ8NCB2 501 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 DNAAF1Q8NEP3 725 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 CPNE2Q96FN4 548 aaPredicted RBP13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 PDCD1LG2Q9BQ51 273 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 EFCAB11Q9BUY7 163 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 ZCCHC2Q9C0B9 1178 aaKnown RBP13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 WDR13Q9H1Z4 485 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 IL23AQ9NPF7 189 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 FBXL4Q9UKA2 621 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 ENTPD4Q9Y227 616 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 CACNA1CQ13936 2221 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 SNRPGP15A8MWD9 76 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 LEFTY2O00292 366 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 RNGTTO60942 597 aaKnown RBP13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 ERAL1O75616 437 aaKnown RBP13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 IFNA4P05014 189 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 ADH1AP07327 375 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 GP1BAP07359 652 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 H2AFB1P0C5Y9 115 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 LMAN2Q12907 356 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 PRPF38BQ5VTL8 546 aaKnown RBP13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 CORO6Q6QEF8 472 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 BAIAP2L2Q6UXY1 529 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 PXKQ7Z7A4 578 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 RFLNBQ8N5W9 214 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 DUSP19Q8WTR2 217 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 PGLYRP3Q96LB9 341 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 PINK1Q9BXM7 581 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 DPH1Q9BZG8 443 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms