RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 KLHL24Q6TFL4 600 aa16.95■□□□□ 0.3
UBXN4-202ENST00000415164 ROPN1LQ96C74 230 aa16.95■□□□□ 0.3
UBXN4-202ENST00000415164 MKS1Q9NXB0 559 aa16.95■□□□□ 0.3
UBXN4-202ENST00000415164 NOP53Q9NZM5 478 aaKnown RBP16.95■□□□□ 0.3
UBXN4-202ENST00000415164 MALT1Q9UDY8 824 aa16.95■□□□□ 0.3
UBXN4-202ENST00000415164 ATP6V1G2-DDX39BF2Z307 99 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 LMX1BO60663 402 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 DNAJA2O60884 412 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 AGR2O95994 175 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 CSF3P09919 207 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 CHI3L1P36222 383 aaPredicted RBP16.94■□□□□ 0.3
UBXN4-202ENST00000415164 CLDN8P56748 225 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 LSM11P83369 360 aaKnown RBP eCLIP16.94■□□□□ 0.3
UBXN4-202ENST00000415164 KRTAP24-1Q3LI83 254 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 EMBQ6PCB8 327 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 ADGRG3Q86Y34 549 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 WDR31Q8NA23 367 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 DDIT4LQ96D03 193 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 MUS81Q96NY9 551 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 NAA11Q9BSU3 229 aaPredicted RBP16.94■□□□□ 0.3
UBXN4-202ENST00000415164 SLC17A5Q9NRA2 495 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 SLC7A10Q9NS82 523 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.94■□□□□ 0.3
UBXN4-202ENST00000415164 TMEM181Q9P2C4 612 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 KCNS2Q9ULS6 477 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 SLC9A8Q9Y2E8 581 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 AMDHD2Q9Y303 409 aa16.94■□□□□ 0.3
UBXN4-202ENST00000415164 TMED7-TICAM2A0A0A6YYA0 188 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 RNASET2O00584 256 aaKnown RBP16.93■□□□□ 0.3
UBXN4-202ENST00000415164 AP3D1O14617 1153 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 KLF11O14901 512 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 SRD5A1P18405 259 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 UQCRC2P22695 453 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 APOBEC3AP31941 199 aaPredicted RBP16.93■□□□□ 0.3
UBXN4-202ENST00000415164 SERPINB5P36952 375 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 KHKP50053 298 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 PHC1P78364 1004 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 KCNJ10P78508 379 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 SLC25A3Q00325 362 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 EMX2Q04743 252 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 IFFO1Q0D2I5 559 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 TSPO2Q5TGU0 170 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 FAM71CQ8NEG0 241 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 PROX1Q92786 737 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 ZG16BQ96DA0 208 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 KCNS3Q9BQ31 491 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 PIMREGQ9BSJ6 248 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 DPY30Q9C005 99 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 PARPBPQ9NWS1 579 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 MOKQ9UQ07 419 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 TMED7Q9Y3B3 224 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 FKBP7Q9Y680 259 aa16.93■□□□□ 0.3
UBXN4-202ENST00000415164 LOC100289279A0A1B0GTE1 492 aa16.92■□□□□ 0.3
UBXN4-202ENST00000415164 TMEM72A0PK05 275 aa16.92■□□□□ 0.3
UBXN4-202ENST00000415164 KRT33AO76009 404 aa16.92■□□□□ 0.3
UBXN4-202ENST00000415164 F12P00748 615 aaPredicted RBP16.92■□□□□ 0.3
UBXN4-202ENST00000415164 GZMKP49863 264 aa16.92■□□□□ 0.3
UBXN4-202ENST00000415164 PDLIM4P50479 330 aa16.92■□□□□ 0.3
UBXN4-202ENST00000415164 SLC16A1P53985 500 aa16.92■□□□□ 0.3
UBXN4-202ENST00000415164 SLC35A1P78382 337 aa16.92■□□□□ 0.3
UBXN4-202ENST00000415164 TGFBR3Q03167 851 aa16.92■□□□□ 0.3
UBXN4-202ENST00000415164 FAM166AQ6J272 317 aa16.92■□□□□ 0.3
UBXN4-202ENST00000415164 FRRS1Q6ZNA5 592 aa16.92■□□□□ 0.3
UBXN4-202ENST00000415164 CNOT9Q92600 299 aaKnown RBP16.92■□□□□ 0.3
UBXN4-202ENST00000415164 VRK1Q99986 396 aaPredicted RBP16.92■□□□□ 0.3
UBXN4-202ENST00000415164 TMEM160Q9NX00 188 aa16.92■□□□□ 0.3
UBXN4-202ENST00000415164 MARCOQ9UEW3 520 aaPredicted RBP16.92■□□□□ 0.3
UBXN4-202ENST00000415164 DCTN4Q9UJW0 460 aa16.92■□□□□ 0.3
UBXN4-202ENST00000415164 FLVCR1Q9Y5Y0 555 aa16.92■□□□□ 0.3
UBXN4-202ENST00000415164 NUP214P35658 2090 aaPredicted RBP16.92■□□□□ 0.3
UBXN4-202ENST00000415164 WDR91A4D1P6 747 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 DNPH1O43598 174 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 EIF1BO60739 113 aaKnown RBP16.91■□□□□ 0.3
UBXN4-202ENST00000415164 SCN2BO60939 215 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 WNT11O96014 354 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 C8BP07358 591 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 APEHP13798 732 aaKnown RBP16.91■□□□□ 0.3
UBXN4-202ENST00000415164 IGFBP5P24593 272 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 FKBP2P26885 142 aaKnown RBP16.91■□□□□ 0.3
UBXN4-202ENST00000415164 HTR3AP46098 478 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 CLK1P49759 484 aaKnown RBP16.91■□□□□ 0.3
UBXN4-202ENST00000415164 POLR2HP52434 150 aaKnown RBP16.91■□□□□ 0.3
UBXN4-202ENST00000415164 PRPS1P60891 318 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 FUT5Q11128 374 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 IQCCQ4KMZ1 466 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 HIKESHIQ53FT3 197 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 VHLLQ6RSH7 139 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 SLC46A3Q7Z3Q1 461 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 C17orf78Q8N4C9 275 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 VPS37AQ8NEZ2 397 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 PKNOX2Q96KN3 472 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 SLC35A5Q9BS91 424 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 C19orf24Q9BVV8 132 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 AKTIPQ9H8T0 292 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 POLE3Q9NRF9 147 aa16.91■□□□□ 0.3
UBXN4-202ENST00000415164 BPGMP07738 259 aa16.9■□□□□ 0.3
UBXN4-202ENST00000415164 IMPDH2P12268 514 aa16.9■□□□□ 0.3
UBXN4-202ENST00000415164 TACR3P29371 465 aa16.9■□□□□ 0.3
UBXN4-202ENST00000415164 SNRPD2P62316 118 aaKnown RBP16.9■□□□□ 0.3
UBXN4-202ENST00000415164 OTUD3Q5T2D3 398 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms