RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 GGTLC2Q14390 218 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 FAM69AQ5T7M9 428 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 STPG1Q5TH74 334 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 RPL22L1Q6P5R6 122 aaKnown RBP9.03□□□□□ -0.96
CD44-206ENST00000415148 UNQ9370/PRO34162Q6UXP9 181 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 Q6ZTK2 550 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 ABHD13Q7L211 337 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 COX18Q8N8Q8 333 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 ZNF527Q8NB42 609 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 FAM98AQ8NCA5 519 aaKnown RBP9.03□□□□□ -0.96
CD44-206ENST00000415148 CAMKVQ8NCB2 501 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 OR5J2Q8NH18 312 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 OR56B4Q8NH76 319 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 HMGB4Q8WW32 186 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 FAM131CQ96AQ9 280 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 SMIM19Q96E16 107 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 WBP1Q96G27 269 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 MRPL48Q96GC5 212 aaKnown RBP9.03□□□□□ -0.96
CD44-206ENST00000415148 ZNF426Q9BUY5 554 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 MEPEQ9NQ76 525 aaPredicted RBP9.03□□□□□ -0.96
CD44-206ENST00000415148 KLHL1Q9NR64 748 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 NKIRAS2Q9NYR9 191 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 ZNF224Q9NZL3 707 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 SERGEFQ9UGK8 458 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 SPACA6W5XKT8 324 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 REV3LO60673 3130 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 A0A0B4J2E0 115 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 A0A1B0GX12 115 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 SYNDIG1LA6NDD5 238 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 TEX46H3BTG2 121 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 ZNF593O00488 134 aaPredicted RBP9.02□□□□□ -0.96
CD44-206ENST00000415148 GMDSO60547 372 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 GYPBP06028 91 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 ATF1P18846 271 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 POU3F2P20265 443 aaPredicted RBP9.02□□□□□ -0.96
CD44-206ENST00000415148 IGFALSP35858 605 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 SIRPAP78324 504 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 PUDPQ08623 228 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 SNTA1Q13424 505 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 SNTB2Q13425 540 aaKnown RBP9.02□□□□□ -0.96
CD44-206ENST00000415148 KLF9Q13886 244 aaPredicted RBP9.02□□□□□ -0.96
CD44-206ENST00000415148 ZSWIM7Q19AV6 140 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 C2orf27AQ580R0 203 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 MANEAQ5SRI9 462 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 KANSL1Q7Z3B3 1105 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 SLITRK4Q8IW52 837 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 PIAS4Q8N2W9 510 aaPredicted RBP9.02□□□□□ -0.96
CD44-206ENST00000415148 ARL14Q8N4G2 192 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 EID2Q8N6I1 236 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 RPLP0P6Q8NHW5 317 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 PIGKQ92643 395 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 HOXB13Q92826 284 aaPredicted RBP9.02□□□□□ -0.96
CD44-206ENST00000415148 DACT3Q96B18 629 aaPredicted RBP9.02□□□□□ -0.96
CD44-206ENST00000415148 PEX11GQ96HA9 241 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 PLEKHA1Q9HB21 404 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 IL21RQ9HBE5 538 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 GDE1Q9NZC3 331 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 SCP2D1Q9UJQ7 156 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 PCOLCE2Q9UKZ9 415 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 ICAM5Q9UMF0 924 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 NPTNQ9Y639 398 aa9.02□□□□□ -0.96
CD44-206ENST00000415148 TRPM6Q9BX84 2022 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 A0A1W2PQU0 124 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 A0A1W2PRG6 482 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 TRABD2BA6NFA1 517 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 NAP1L6A6NFF2 107 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 PEX12O00623 359 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 SCAMP1O15126 338 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 PLRG1O43660 514 aaKnown RBP9.02□□□□□ -0.97
CD44-206ENST00000415148 PRAF2O60831 178 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 GPR75O95800 540 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 ECDO95905 644 aaPredicted RBP9.02□□□□□ -0.97
CD44-206ENST00000415148 APODP05090 189 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 RPL6Q02878 288 aaKnown RBP9.02□□□□□ -0.97
CD44-206ENST00000415148 HSF2Q03933 536 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 ILF3Q12906 894 aaKnown RBP eCLIP9.02□□□□□ -0.97
CD44-206ENST00000415148 CDK5R1Q15078 307 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 DEFB134Q4QY38 66 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 UBE2NLQ5JXB2 153 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 ZNF776Q68DI1 518 aaPredicted RBP9.02□□□□□ -0.97
CD44-206ENST00000415148 SFRP4Q6FHJ7 346 aaPredicted RBP9.02□□□□□ -0.97
CD44-206ENST00000415148 KIAA1324Q6UXG2 1013 aaKnown RBP9.02□□□□□ -0.97
CD44-206ENST00000415148 LINC00114Q6XXX2 140 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 CHMP1BQ7LBR1 199 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 NLRC3Q7RTR2 1065 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 HDDC2Q7Z4H3 204 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 OR4N5Q8IXE1 308 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 CYB561A3Q8NBI2 242 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 GALNT11Q8NCW6 608 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 FLVCR1-AS1Q8TAF5 88 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 SMIM4Q8WVI0 70 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 ASB12Q8WXK4 309 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 RSC1A1Q92681 617 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 FGF13Q92913 245 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 OR2M4Q96R27 311 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 TNFRSF13CQ96RJ3 184 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 MRI1Q9BV20 369 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 GSDMCQ9BYG8 508 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 TRIM2Q9C040 744 aa9.02□□□□□ -0.97
CD44-206ENST00000415148 SRMSQ9H3Y6 488 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms